Pyrobaculum arsenaticum: Pars_1315
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Entry
Pars_1315 CDS
T00503
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
pas
Pyrobaculum arsenaticum
Brite
KEGG Orthology (KO) [BR:
pas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pas03016
]
Pars_1315
Enzymes [BR:
pas01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Pars_1315
Transfer RNA biogenesis [BR:
pas03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
Pars_1315
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
SPL
TRAM
T2SSE
DUF1450
Motif
Other DBs
NCBI-ProteinID:
ABP50878
UniProt:
A4WKG1
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All DBs
Position
1186556..1187806
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AA seq
416 aa
AA seq
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MARAYIETYGCWLAKADAEIIRQRLGLVAVERPEDADVVMIYTCAVREDGEVRQLARIRE
LAGLRKEVVVAGCLAKLRPYTIKSAAPNARLLYPSEVEGGQKREMKVLPRYEGGVIYTVP
LQVGCLGNCTFCATKYTRGGAGYVKSANPDDVVRHVKEAVARGAKEIYLTGQDVITYGFD
MRWRPGWSLPDLLERILREVEGEYRVRIGMSEPWVFARFADRLLDIVKGDRRVYRYFHLP
VQSGSDRVLRAMGRRYTVDEYRELVRKIRKTLGEFAFVATDIIVGFPGEAEDDFWESVKL
VEELQLDKVHVARFSPRPFTEAAVMPRQVPDAEKKRRSKILSEVSLRVARLRNGLRVGSR
DVVLIDEVDHGLVVGRASDYRQVVVKRGHGDGLIGQYREVQIVAAGAVYLYGDIVE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
gtggcaagggcctatatagagacttatggttgttggctggctaaggccgatgcggagatc
atcagacagagactggggcttgtggctgtggaaaggcccgaggatgccgacgtggtgatg
atctatacatgcgcggtgagggaagacggcgaggttcgccagcttgcaagaataagggag
cttgcgggtctacgcaaggaggttgtggtggcgggttgtctcgccaagctgaggccgtat
acgattaaatccgcagcgcctaacgcgcgtctgttatacccctctgaggtggagggtggg
cagaagagggagatgaaggtactgcccaggtacgagggcggcgtcatttacacggtgcct
ctacaggtcggttgcctcggcaactgcaccttctgcgctactaagtacacgcggggtggc
gccggctacgtcaagagtgccaatcccgacgacgtggtgcgccacgtgaaggaggccgtg
gcgaggggggcgaaggagatctacctgacaggtcaagacgtcattacctacggtttcgac
atgaggtggaggcccggctggagcctgccggatctcctggagcggatattgagggaggtg
gagggggagtacagggttaggataggcatgtcggagccttgggtatttgcgaggtttgca
gatcgtctcctcgacattgttaagggcgaccgccgggtgtaccgatacttccacctcccg
gtgcagtccggaagcgatagggtgcttagagcgatggggcggagatacaccgttgatgag
tatagggagcttgtgaggaagattaggaagacgttgggagagttcgcctttgtcgccacc
gatatcatagtcggcttccccggcgaggctgaggacgacttctgggagtcggtgaagctg
gtggaggagctccagctggacaaggtgcacgtggctaggtttagcccgaggcccttcaca
gaggccgctgtcatgcctagacaagtccccgacgcggagaagaagaggaggagcaaaatc
ctgagtgaggtctctcttagagtggcccgtctgagaaacggcctgcgtgtggggagccgt
gacgtcgtcttaatcgacgaggttgaccacgggttggttgtcggccgcgcaagcgactac
agacaggtggtggtgaaaaggggccacggcgacggcctcattggccagtacagagaagtc
cagatagtcgccgctggcgcagtctacctctacggcgacattgtagagtag
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