KEGG   Pyrobaculum arsenaticum: Pars_1788
Entry
Pars_1788         CDS       T00503                                 
Name
(GenBank) monomeric archaeal DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
pas  Pyrobaculum arsenaticum
Pathway
pas03030  DNA replication
pas03410  Base excision repair
pas03420  Nucleotide excision repair
pas03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pas00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Pars_1788
   03410 Base excision repair
    Pars_1788
   03420 Nucleotide excision repair
    Pars_1788
   03430 Mismatch repair
    Pars_1788
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pas03032]
    Pars_1788
   03400 DNA repair and recombination proteins [BR:pas03400]
    Pars_1788
DNA replication proteins [BR:pas03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Pars_1788
DNA repair and recombination proteins [BR:pas03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Pars_1788
   MMR (mismatch excision repair)
    Other MMR factors
     Pars_1788
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    Pars_1788
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad9 DUF6252 DUF6334 DUF5766
Other DBs
NCBI-ProteinID: ABP51339
LinkDB
Position
complement(1608235..1608984)
AA seq 249 aa
MSKQVLTYIDAKEFAYIIDSVSVIVEEASFVLRQDGLHLRALDVSRTAMVDLSIPKEAFE
EFPEVDELRFGFNFKDLKKLLRRVKKGDKISIEFEEGRARIKLIGKATRSITVPSIEILS
EDLPTPKVVYTAMVKTASDVLASAVKDADAVADEAKFDASEEALVISASSDKGEVEVRLD
KNSELVYEFDVKEPASARFSLEYLLDITSKTSKISDMVTIELATAKPLLLTFDIPAGGRI
SYYIAPRVE
NT seq 750 nt   +upstreamnt  +downstreamnt
atgtctaaacaggtgctgacctacatcgacgcgaaggagtttgcttacataatagactcc
gtgtcggtcattgtggaggaggctagctttgtcttgagacaagatggcctccacctcaga
gcgttggacgtgtcgcggactgcgatggtagacctttcaattccaaaagaggcgtttgag
gaatttcctgaagtagacgagttgcggttcggttttaattttaaggatttgaagaagcta
ctaaggcgggttaagaagggcgataagatttctatcgagtttgaagaggggcgggctagg
attaagctaattggcaaggccactagatctataacggtcccatccatcgagatcctcagc
gaggacctcccaactcccaaggtggtctacacagctatggtaaagacggcaagtgatgtg
ttagcatcggctgtaaaagatgctgatgcggttgcagacgaggcgaaattcgacgcaagt
gaagaggcccttgtaataagcgcatcaagcgacaagggcgaagtggaggtaaggcttgac
aaaaacagcgagcttgtttacgaatttgacgtgaaggagccggcctctgcgaggttttcc
ctagaatatcttctggatatcacgagcaagacttcaaagatcagcgatatggtgaccata
gagctggccacagcaaagccgcttctcctaaccttcgacatccctgccggggggcggatt
tcttactacatagcaccaagagtagagtga

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