Pyrobaculum arsenaticum: Pars_2346
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Entry
Pars_2346 CDS
T00503
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pas
Pyrobaculum arsenaticum
Pathway
pas04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Pars_2346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pas03019
]
Pars_2346
03009 Ribosome biogenesis [BR:
pas03009
]
Pars_2346
04131 Membrane trafficking [BR:
pas04131
]
Pars_2346
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pas04147
]
Pars_2346
Messenger RNA biogenesis [BR:
pas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Pars_2346
Ribosome biogenesis [BR:
pas03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Pars_2346
Membrane trafficking [BR:
pas04131
]
SNARE
SNARE associated proteins
Others
Pars_2346
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Pars_2346
Exosome [BR:
pas04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Pars_2346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_22
TIP49
AAA_5
AAA_33
AAA_2
AAA_14
AAA_28
AAA_lid_PRS2_C
IstB_IS21
Vps4_C
nSTAND3
AAA_18
Mg_chelatase
UFD1_N2
RNA_helicase
AAA_24
DUF815
Sigma54_activat
ABC_tran
AAA_7
PhoH
NPHP3_N
Parvo_NS1
Zeta_toxin
AAA_17
TsaE
ATPase
AAA_19
SLFN-g3_helicase
AAA_30
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
ABP51889
UniProt:
A4WNC2
LinkDB
All DBs
Position
2096549..2098744
Genome browser
AA seq
731 aa
AA seq
DB search
MSEWIELRVLESKARDANRPVVRIDPEVMERTGIAVGDVIEIVGRRRTAAKVWNGLPEDR
GKGVIRMNSILRKNADVSLNETVKVRRVEPKPAAFVKLAPVSMTIAVDANFLQYIKQRLR
EYVVVEGDMLQIYVLSQPLTFQVVQTKPSNAILIITEDTQIQIFEKPVSGVKIPHVTWED
IGDLEDAKQKIRELVELPLRHPELFKHLGIEPPKGILLIGPPGTGKTLLAKAVANEANAY
FVAINGPEIMSKYYGESEARLREIFEEAKKNAPAIIFIDEIDAIAPKREEVTGEVEKRVV
AQLLTLMDGLQERGQVVVIGATNRPDAVDPALRRPGRFDREIWINPPDFKGRYEILQIHT
RNMPLAPDVDLRKLAEITHGFSGADLAALAREAAMSALRRAIQSGLIDLNQPSIPPEVFE
QIKVTMADFTSALREIVPSALREIHIEVPRVRWEDVGGLENVKQELREAVEWPLKYPEKF
KKFGLRPPKGILLFGPPGTGKTLLAKAVATESGANFIAVRGPEIFSKWVGESEKMVREIF
RKARMAAPAVVFIDEIDALATARGFGGDSLVSERVVAQLLAEMDGIKALENVVVIAATNR
PDLVDPALLRPGRFDRIIYVPPPDYKARLDILLIHTRATPLAKDVGLEELARRTEGYSGA
DLELLVREATFLALREDINAKEVSMRHFEEALKKVRPSVAPDMLKFYETWLEKARQLTVS
PKAKATPPLYL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgaatggattgagcttagggttcttgagagtaaggctcgggatgccaataggccc
gtggttaggattgatcctgaagtgatggagagaacggggattgctgttggcgatgtgatc
gaaatagtggggaggaggaggacggccgccaaggtgtggaacggcttgcctgaggatagg
gggaagggcgtcataaggatgaacagcatattgaggaaaaacgccgatgtttcacttaat
gagactgttaaggttaggcgggtcgagccgaagccggcggcttttgtaaagctggcgcct
gtatctatgacaatcgcagttgatgctaactttctacaatatatcaagcagaggctgagg
gagtacgtggttgtggagggcgacatgttgcagatatacgtgctgagccagccccttacg
ttccaagtagtgcagacaaagccttccaacgctattcttataattaccgaagacacgcag
atccagatatttgaaaagcctgtctccggcgtcaagatacctcatgtcacttgggaggat
attggtgatttggaggatgctaagcagaagattcgggagcttgtggagcttcctcttcgt
cacccggagctttttaagcatttgggtattgagccgcctaagggtattctgttaattggc
cctcccggtactgggaagacgcttttggcaaaagccgttgccaacgaggccaacgcctac
ttcgtagccataaatgggccggagattatgtctaagtactacggcgagagtgaggctagg
ctgagggagatattcgaagaggctaagaaaaacgccccggcgataatcttcatcgacgaa
atagacgccatagcccccaagagggaggaggtgacgggcgaagtggagaagagagtagta
gcccagctgttgacattaatggacggactacaagaaagaggccaagtagtagtcatagga
gccaccaacagaccagacgcagtagacccagcactaagaagaccaggaagattcgacaga
gagatttggattaatccgccagatttcaaggggaggtacgaaattctgcaaattcatacc
cgcaacatgccgctggcgccggatgttgacttaaggaagttggctgagatcacacatggc
ttctctggagcagatctcgccgcgttggcgagagaggctgcgatgtcggcgttgaggagg
gcaattcagagtgggcttattgatctgaaccagccgtcgataccgcctgaggtgtttgaa
cagattaaggtcaccatggcggatttcaccagcgcgctgagggagattgtgccctctgcg
ctgagggagatacatatcgaggtgccgagagtgaggtgggaggatgttggcggcttggag
aacgtgaagcaagagcttagggaggctgtggagtggccgcttaaatatccggaaaagttt
aagaagttcggccttaggccgccgaaggggattctgctctttgggccaccaggtacgggg
aagaccctactcgccaaggcggtggccacggagtcgggggccaacttcatagccgttagg
gggcctgagatcttctctaagtgggttggcgagagcgagaagatggtgagagagatattt
aggaaggcgcgaatggcggctcccgctgttgtttttattgacgaaattgatgccttggcc
actgcaagggggtttggcggggattccctagtcagcgaacgcgtagtggctcaactattg
gcggaaatggatggcataaaggcgttggagaacgtagtcgtcatcgcggcgactaatagg
cctgatttagtagacccggcgttgctgaggcctgggcgcttcgacaggattatatacgtg
ccgccacccgattacaaggcgcggcttgacatattactaatacatacgagggccacgccg
cttgccaaggacgtaggcctagaagaactagccaggaggaccgagggatattcgggcgcc
gatctagagcttctggtgagagaggccaccttcttggcgttgagagaggatataaacgcg
aaggaggtgtcaatgagacatttcgaagaggcgttaaaaaaggtgaggccctcagtggct
cctgacatgcttaagttctacgagacttggctagagaaggcgaggcaacttacggtgtct
cccaaggctaaggcgacgccgcctctgtacctatga
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