Peribacillus asahii: BAOM_0356
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Entry
BAOM_0356 CDS
T06700
Symbol
deaD
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pasa
Peribacillus asahii
Pathway
pasa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BAOM_0356 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pasa03019
]
BAOM_0356 (deaD)
03009 Ribosome biogenesis [BR:
pasa03009
]
BAOM_0356 (deaD)
Enzymes [BR:
pasa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BAOM_0356 (deaD)
Messenger RNA biogenesis [BR:
pasa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BAOM_0356 (deaD)
Ribosome biogenesis [BR:
pasa03009
]
Prokaryotic type
rRNA helicases
BAOM_0356 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AZV41033
UniProt:
A0A3T0KL35
LinkDB
All DBs
Position
314062..315546
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AA seq
494 aa
AA seq
DB search
MTLFSELGLDRTSMKSIEKMGFEEASPIQAQTIPLALEGKDIIGQAQTGTGKTAAFGIPL
MENIDINDENVQGIVIAPTRELAIQVSEELFKLGYGKRARVLAVYGGQDIDRQIRALKKK
PHIIVGTPGRLLDHIKRKNIRLGNVHTVVLDEADEMLNMGFIEDIESILSTVPEERQTLL
FSATMPDPIRKIAETFMQNPTLVRVKAKEMTVDRIEQYYVDLRENEKFDTLARLLDIQTP
ELAIVFGRTKRRVDELSSALNIRGYMAEGIHGDLSQAKRLSVLKKFKEGNIDVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKHGVAITFVTPRERGQLQAVEHTTK
KRMVKMKTPTLTEALEGQQKAVTEKIQNTIENEDLSLYLAQAEELMQKHTAVDLVAAMLK
TLTKEPDQTPVKLTDEAPMPMRRDRNRGGSSNNRNRNGRSSSGRKDFGAKRSNNRKSNGH
GNRSSSQRREKQSH
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
ttgacattgtttagcgaattaggattagatagaacgtctatgaaatcaattgaaaaaatg
ggatttgaggaagcgagtccgattcaagctcaaacgattccgttagcgcttgaagggaaa
gatattatcggtcaagctcaaactggaacaggtaaaacagcagcatttggtattccgtta
atggaaaatatcgatataaatgacgagaatgtacaaggaattgtcattgctccaacacgt
gaacttgcgattcaagtttctgaagaactcttcaaacttggctacggaaaacgagcgcgt
gtactagcggtatatggtggtcaagatatcgatcgtcaaatccgtgctttaaagaaaaaa
ccacatattattgttggtacaccaggtcgtttacttgaccatattaaacgtaaaaacatc
cgtttaggcaatgtacacacagtggtacttgatgaagcagatgaaatgttaaacatggga
ttcattgaagatattgagtctattttgtctactgttccagaagagagacaaacattgtta
ttctcagcaacaatgcctgacccaattcgtaaaatcgcagaaacattcatgcaaaatcca
acgcttgtacgtgtaaaagcaaaagaaatgacagttgaccgtattgagcaatactatgtc
gatttaagagaaaatgagaagttcgatacgttagcgcgtcttcttgatattcaaacacca
gagcttgcgattgtatttggtcgtacaaagcgtcgtgtggatgaactgtcatctgcttta
aatatccgaggttatatggctgaaggaattcacggtgatttaagtcaagcgaagcgtttg
tctgtgttaaagaaatttaaagagggtaacattgatgtattagttgcaacagacgtagcg
gcacgtggtttggatatctcaggtgttacgcacgtgtataacttcgatattcctcaagat
ccagaaagctacgttcaccgtattggacgtactggacgtgcaggtaaacatggtgtagcg
attacatttgttactccgagagaaagaggtcaattacaagctgttgaacatacaacgaaa
aagcgtatggtgaaaatgaagacaccaactttgacagaagcgttagaaggacaacaaaaa
gctgttacagaaaaaattcaaaacacaattgaaaatgaagatctttccttataccttgca
caagcagaggagttaatgcaaaagcatacagcggttgatttagtagctgcaatgttgaaa
acattaacaaaagagccggatcaaacgcctgttaaattaacagatgaagcaccaatgcca
atgcgtcgtgatcgtaaccgtggcggcagctctaataatagaaatcgtaacggacgcagc
tcatctggcagaaaagatttcggtgctaaacgttcgaataaccgtaaatcgaatggtcat
ggcaaccgtagctctagccaaagacgtgaaaaacaaagccattaa
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