Peribacillus asahii: BAOM_3278
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Entry
BAOM_3278 CDS
T06700
Symbol
rnj
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
pasa
Peribacillus asahii
Pathway
pasa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BAOM_3278 (rnj)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pasa03019
]
BAOM_3278 (rnj)
Messenger RNA biogenesis [BR:
pasa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BAOM_3278 (rnj)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
TNFAIP8
Motif
Other DBs
NCBI-ProteinID:
AZV43887
UniProt:
A0A3Q9RNY3
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Position
3065876..3067549
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AA seq
557 aa
AA seq
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MTMQENALSIFALGGVNEIGKNMYVIQYENDLFIIDCGSKFPNEDLLGIDLIIPDITYLQ
ENKDKIQALIVTHGHEDHIGGIPYFLKELNVPIYATRFTLGLIELKLKEHGLLRDSKLIQ
IDEDSHFDFGQTGVSFFRTSHSIPDCLGIVFHTPEGVVVHTGDFKFDLTPVNNQYTDIHK
MADIGKQGVLVLLSESTNAERPGSSPSEQLVGGHIEEAFRKAERKVIISTFASNVNRLQQ
VVDAAQKTNRKLALLGRTMVNVVSVAMERGYLQVPDGMLIEAQQINEMAPEKVAILCTGS
QGEPMAALSRLSSSNYRDVDILPQDTVIIAAGPIPGNERSVSRIVDNLYQLGANVIYGSG
SVTGMHVSGHAYQEELKLMLTLMKPKYFIPIHGEFRMLHHHRLLAESVGVKQGNTFIINN
GDVIDINNQVARQTRKIPSGNIYVDGVGVGDVGNIVLRDRKQLSEDGMLVIVVTLSKMER
KIISGPDTISRGFVYARDSEELLREVNRLVKTTVNDLQEANRYQWNVMKQSIKKAVGQYV
YSQTKKKPMILPIIIEV
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgactatgcaagagaatgcattatctattttcgccttagggggcgtaaatgaaattggt
aagaatatgtatgtgattcaatatgaaaacgatctctttatcattgattgcggttctaaa
tttccaaatgaagatttattaggcatcgatttaatcatccctgatattacttatttacaa
gagaataaggataaaattcaagcgttaattgttacacatggacatgaagatcatataggg
ggaatcccttacttcctaaaagaattaaatgtacccatctatgctacacgctttacactt
ggtttaattgaattaaaattaaaagaacatggactgctgcgagatagcaaattgattcaa
attgatgaagattcacattttgattttgggcagaccggtgtaagcttttttagaactagc
catagtatccccgattgtctaggcattgtcttccatacaccggaaggagtcgtcgtccat
actggggacttcaaattcgatttaactcctgtgaataatcagtatacggatattcataaa
atggctgacatcggcaaacaaggtgtgttagttctattatccgaaagtacgaatgctgaa
cgccctgggtcttctccatcggagcaacttgtaggcggccatattgaagaagccttccgg
aaagccgagcggaaagtcattatttctacttttgcttctaatgttaatcgccttcaacaa
gtagtagatgctgcacaaaagacaaatcgaaagcttgcattgcttggtcgaacaatggtg
aatgtcgtctctgtcgcgatggaacgtggttatttacaagttcctgatgggatgctaatt
gaagcgcagcaaataaacgaaatggctcctgaaaaggtagctatcctatgcacaggaagc
caaggggagccgatggccgccctttcccgtctatctagctcaaattatcgagatgtagac
attctacctcaggatacagttattatagcggcaggtccgataccgggaaatgaacgaagt
gtttcgcgtattgtagacaacttatatcaattaggggctaacgtgatttacggatcagga
agtgtaacaggcatgcacgtttctggacatgcctatcaagaagaattaaagctgatgctt
acgctaatgaaacctaaatatttcattccaattcatggcgagtttaggatgctgcatcat
caccgtttattagctgaatcagttggcgtgaagcaaggaaatacatttatcattaataat
ggtgatgtcattgacattaacaaccaagttgctcgtcaaactcgaaagataccttctggg
aatatttatgtagacggtgtaggtgttggtgacgttgggaatatcgtgttacgagatcgt
aaacagctttctgaggatggcatgctagtcattgtagttactcttagtaaaatggaaaga
aaaatcatttctggccctgacaccatttcccgcggctttgtctatgcacgagattctgag
gaacttctaagagaagtgaatcgacttgttaaaacaactgttaacgacttacaagaagcg
aatagatatcaatggaatgtaatgaaacaaagtattaaaaaagccgttggacaatatgta
tatagtcaaacaaagaaaaagccgatgattcttccgattattatcgaagtttaa
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