Candidatus Phytoplasma asteris: QN326_04340
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Entry
QN326_04340 CDS
T10435
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pase Candidatus Phytoplasma asteris
Pathway
pase03020
RNA polymerase
Brite
Enzymes [BR:
pase01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QN326_04340
Transcription machinery [BR:
pase03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QN326_04340
DNA repair and recombination proteins [BR:
pase03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QN326_04340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WZX02419
LinkDB
All DBs
Position
364882..368943
Genome browser
AA seq
1353 aa
AA seq
DB search
MSDNRLFTSVETLNLSSPVLEKLKLSGINTLEDFNTFTLEELRLLLQEAFLEVLPILKNF
ALPRNLQNLDLSEAVINILTELGMEDFQDLLQTKMAVLTKAFETNPLAFQKLNDLFKLYN
HFPSISSDKEYGSRDYDYFKIRLAAPEEIRQWSYGEVTSYETINYRTYKPEISGLFCQKI
FGPVVDFQCACSKKQVSIKSQFCNKCGVEFTETKVRRERMGHIELQTPIVHTWYLNSSPS
RLAILLNIKTKQLEEIVYYVSYVVIDPGKTEFKPKEIITETQYSEALYEFGNAFVALTGA
EAVKKLLENLNLEKTIKVLRKSLSENSKQKRESIIKRLEIIESFHQSDNKPEWMVMDVIP
VLPPGLRPMVPLDGGRFATTEVNDLYRRILNRNNRLKKQMLQKAPRLIIKNEKRMLQEAV
DALFDNAKTSKKNVNNVEKNRPLKSLSEMLRGKQGRFRQNLLGKRVDYSGRSVIIVGPDL
EMHQCGVPREMAIILFKPFILKKLQETKGIDKKNANTIYEKMNEEVWNALEEVVKEHPVL
LNRAPTLHRLGIQAFDPKLIDGKAIRLHPLVTPAFNADFDGDQMAIYVPLSLEAQAEARL
LMLVSNNILDPKNGNPVVTPSQDMVLGNYYLTIEEKKDRTINSYDAAQRTAEHQYKHRNE
GAFFADINEAKTAYQNKEIHLHTRIFIKPQAINLSFTEEQRQKYLMTTLGKLIFNDILPP
SFPYINEPTQFNLDVKTPDAYFLAPGTNPKQFLKKLPTPKPFNKKFLSMIIACFFKQMKI
TETSKMLDHIKNLGFKYSTIAGITVSFADINTYSNKQELLQEVEARNIQIETWYNDGFLT
DAERRRLVINEWKNIRDEIQEGLMKEFQQDNHIFMMSESGARGSVSNFTQLAGMRGLMNN
PKGEIIEVPVKASFREGLKVSEFFISTHGARKGSTDTALKTAESGYLTRRLVDVTQDIVV
IKEDCNSDRGFVVEAMISDGKEIVSLKQRIMGRFASCDICHPKTNALIIARNELITESKA
QEIITAKIKKVPIRSILTCNCEYGICAKDYGVNLATNKLVEIGEAVGVIAAQSIGEPGTQ
LTMRTFHTGGVASASDITQGLPRIEELFEVRKPKGKALISELKGKIKKIDKIRSQNPEIV
ITEENDPDTEHRYILEPNVDILVSKNNSVYPGQKLTSGSVDLKELLRVAGTTEAQKYILE
EVQKVYRAQNVYISDKHIEIIIHQMFKQILIIDEGDTQLLPGTEITINNFKKANLKMLEE
NKLLAVGRPIILGITRSSLRSDSLLSAASFQETTKILIDAAIKGKTDHLYGLKENVIIGG
LIPAGTGILETTLFKYPKEPATTSELAEKTNQN
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataacagattatttacttcagtagaaactttaaatctttcatctccagtttta
gaaaaattaaaactttctggaatcaatactttggaagattttaacacttttactttagaa
gagttaaggcttttactgcaagaagcttttttagaagttttacctatcctcaaaaacttc
gccctacctcgcaatttacaaaatctagatttgagtgaagccgttattaacattcttact
gaactaggaatggaagattttcaagatcttttacaaactaaaatggctgtccttacaaaa
gcatttgaaaccaatccccttgcttttcaaaaattaaacgacctatttaagttatacaac
cacttcccttctatttcatctgacaaagaatacggtagtagagattatgattattttaaa
atccgtctagctgctcctgaagaaatcagacagtggtcttatggtgaggttactagctac
gaaacaattaactatcgcacctataaaccagagatatcaggattattttgtcaaaagatt
tttggtccagtagttgatttccaatgtgcttgttctaaaaaacaagtcagcatcaaaagt
caattttgtaacaaatgtggagttgaatttaccgaaaccaaagtgcgtcgtgaaagaatg
ggacacatcgaattacaaacccccatcgtccacacttggtaccttaactcttctcccagc
cgtttagctattcttttaaacatcaaaactaaacaattagaagaaatagtttattatgtt
tcttacgttgtaattgatcctggaaaaaccgaattcaaacctaaagaaattattacagaa
acccaatacagtgaagctctttatgaatttggaaacgcttttgtagctttaacaggtgcc
gaagcggttaaaaaattactagaaaatctcaatttagaaaaaactatcaaagtccttcgc
aaatctttatcggaaaattccaaacaaaaaagagaaagcattattaaaagactagaaatc
atcgaatcttttcatcaatcagacaacaaacctgaatggatggtaatggatgttattcct
gtattgcctccgggattaagaccgatggttcctttagatggtggtcgttttgccactact
gaagtcaacgatctttaccgccgcatccttaatcgcaacaatcgtttaaaaaaacaaatg
ctccaaaaagctcctcgtttaatcattaaaaatgaaaaaagaatgctacaagaagcagtt
gatgctttatttgataatgccaaaactagcaaaaaaaacgttaacaacgtcgaaaaaaat
cgcccgcttaaatctttatccgaaatgctacgcggtaaacaagggcgtttccgtcaaaat
cttttaggtaaaagagtggattattcgggacgatccgtaattattgtaggtcctgattta
gaaatgcaccaatgcggtgtgcctcgtgaaatggcaattattttgttcaaacctttcatt
ttgaaaaaactacaagaaaccaaaggaattgacaaaaaaaacgccaacaccatttatgaa
aaaatgaatgaagaagtttggaacgccttagaagaagtagtcaaagaacacccggtcctt
ttaaaccgcgccccaacactacaccgtttaggaattcaagcttttgatcctaaattaatt
gacggtaaagccattcgcctccaccctttagttacgcctgcctttaatgccgattttgat
ggcgaccagatggcaatttatgtccctctttctttagaagcccaagccgaagcacgctta
ttgatgcttgtttcgaacaacattttagaccctaaaaatggtaatccagtagtaacacct
tcccaagatatggttttaggaaactactatttaaccattgaagaaaaaaaagatcgcact
ataaacagctatgatgctgcccaaagaactgcagaacaccaatacaaacatcgcaatgaa
ggagctttttttgctgacatcaacgaagccaaaaccgcttatcaaaataaagaaatccac
cttcacacaagaatttttatcaaaccacaagcaattaatttatcatttaccgaagaacaa
cgtcaaaaatatttaatgactactttaggaaaattaatttttaatgacattttgcctcca
agtttcccctacattaacgaaccaactcagtttaatttggatgtcaaaacccctgatgct
tattttttagctccaggaaccaaccccaaacaattcctaaaaaaacttcccacccctaaa
ccttttaacaaaaaattcctatctatgattattgcatgttttttcaaacaaatgaaaatt
acagaaacttccaaaatgttagatcacatcaaaaacttaggtttcaagtattctactatc
gcaggaattacagtttcatttgcagacatcaatacttactccaataaacaagaattgtta
caagaagtagaagcacgcaatattcaaattgagacttggtacaacgatggttttttaaca
gatgccgaacgtcgtcgtttagtaattaacgaatggaaaaatattcgtgatgaaattcaa
gaaggcttgatgaaagaatttcaacaagacaaccacatttttatgatgagcgaaagtggc
gcacgtggtagtgtttctaactttactcaattagcagggatgagagggttaatgaataac
cctaaaggtgaaattattgaagtccctgttaaagcttctttccgagaaggtctgaaagtt
tctgagtttttcatctctactcacggagcccgtaaaggttcaactgacactgccctcaaa
acagccgagtcaggttatctaacgcgtcgtttagttgacgtaactcaagatattgttgtt
atcaaagaagactgcaatagtgaccgcggttttgttgtagaagctatgattagcgacggc
aaagaaattgtttcactcaaacaacgcattatgggacgctttgctagttgcgacatttgt
catcccaaaaccaacgcccttattatagcgcgcaatgaattaattactgagtccaaagcc
caagaaattattactgccaaaattaaaaaagttcctattagaagcattttaacttgtaat
tgtgaatatggtatttgcgccaaagactacggcgtcaatctagctaccaataaattagta
gaaattggcgaagctgttggtgttattgctgctcaatccattggggaaccaggaactcaa
ttaactatgagaactttccatactggaggagttgcttctgcctcagatattactcaaggt
cttccaaggatcgaagaattatttgaagtacgcaaacctaaaggaaaagcgctaatcagc
gaattaaaaggaaaaatcaaaaaaattgataaaatccgttcccaaaatccagaaattgta
atcacagaagaaaatgaccctgacacagagcaccgttatattttggaacctaatgtcgat
attttagtaagcaaaaacaacagtgtttatcccggtcaaaaactaacttctggttcggtt
gatctaaaagaacttttaagagtggcaggcacaacagaggctcaaaaatacatcttagaa
gaagtacaaaaagtttatcgtgcccaaaatgtttatatcagcgacaaacacatcgaaatt
attattcaccaaatgtttaaacaaattttaattattgatgaaggtgatactcaactttta
cctggcacagaaattactattaataactttaaaaaagctaatttaaaaatgttagaagaa
aacaaacttttagcagtggggcgccccattattttaggaattacgcgttcttctttaaga
agtgattctttactgtcagctgcatctttccaagaaactactaaaattctaatcgatgct
gccatcaaaggaaaaaccgaccatctttacggacttaaagaaaatgttattattggtggc
ttaattcctgcaggaacaggtattttagaaactactttatttaaatatccaaaagaacct
gcaaccacttctgaacttgctgaaaaaactaaccaaaattaa
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