Pseudomonas asgharzadehiana: KSS96_00590
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Entry
KSS96_00590 CDS
T07697
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pasg
Pseudomonas asgharzadehiana
Pathway
pasg03420
Nucleotide excision repair
pasg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pasg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KSS96_00590 (uvrD)
03430 Mismatch repair
KSS96_00590 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pasg03400
]
KSS96_00590 (uvrD)
Enzymes [BR:
pasg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KSS96_00590 (uvrD)
DNA repair and recombination proteins [BR:
pasg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KSS96_00590 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
KSS96_00590 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QXH67469
LinkDB
All DBs
Position
126938..129121
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLAQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRSIYEAYE
AACVRAGVIDFSELLLRALDLWRDNPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIYQYSEDFPDAVTIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINIPARGI
GEKTVEAIRDHARHADVSMWEAMRLLIANKGLTGRAAGALGVFVELIENLAAKCADMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARAFENTEEDEELTPLAAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQ
QQHSSHLFAGSEIPQTPFSLGQQVKHSVFGEGVILNFEGAGAQARVQVNFAEGSKWLMMG
YAKLEAV
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctctcttttgctgaactccctcaacgatgcccaacgccaggccgta
gcggcccccgttggccgtcagttggtcctggccggtgctggctccggtaaaacccgagtg
ctggtgcaccgtatcgcctggttgatccaggtcgagaacgcgtccccgcattccatcctg
tcggtaaccttcaccaacaaggccgccgccgagatgcgccaccgcatcgagcagttgatg
ggcatcagcccggccggcatgtgggtgggcaccttccacggcctggcgcaccgcctgttg
cgggcgcattggcaggaagcaggcctggcccagacgttccagatccttgacagcgatgac
cagcaacgcctggtcaagcgggtgatccgtgagctggggctggatgaacagcgctggccg
gcgcgccaggcgcagtggtttatcaacggccagaaggacgagggcctgcgcccgcaacat
atccaggccagcggcgacctgttcctggccaccatgcgcagcatttatgaagcctacgag
gctgcctgcgtacgcgccggtgtgatcgacttctccgaactgctgttgcgcgccctcgac
ctgtggcgcgacaaccccggtttgctggcccattaccagaagcgcttccgccacattctg
gtggacgaattccaggacaccaacgccgtgcagtacgcctggttgcgcctgctggccaag
ggcggcgacagcctgatggtggtgggtgacgacgaccagtcgatttacggctggcgtggc
gcgaaaatcgagaacatctaccagtactccgaagacttcccggacgcggtgaccatccgc
ctggagcagaactaccgttcaaccgccggtatcctcaaggccgccaacgccttgatcgcc
aacaacaccgggcgcctgggcaaagagctgtggaccgacggcggcgaaggcgaagcgatc
aacctctacgccgcgttcaacgagcacgacgaggcgcgctatgtggtggaaaccattgaa
agcgcgctgaagaccggcctcgcgcgcagcgatatcgccattttgtaccgttccaacgcc
caatcgcgggtgttggaagaagccttgctgcgcgagcgcatcccctaccgcatctatggc
ggtcagcgcttcttcgagcgtgccgaaatcaagaacgccatggcctacctgcgcttgctg
gaaggccgcggcaacgatgcggcactggagcgggtcatcaacatccccgcgcgcggcatc
ggtgagaaaaccgttgaagcgatccgcgaccacgcgcgccatgccgatgtgtcgatgtgg
gaagccatgcgcctgctgatcgccaacaaaggcctgaccggccgtgccgccggggcgctg
ggtgtgtttgtcgagttgatcgagaacctcgccgccaaatgtgcggacatgccgctgcac
ttgatgacccagacggtgattgagcaatccgggctgattgcctaccacgaagcggaaaaa
ggcgaaaaaggccaggcccgggtagaaaaccttgaggaactggtcagcgccgcgcgcgcg
ttcgaaaacaccgaggaagacgaagagctgaccccgcttgcggcgttcctgggccacgcg
tcgctggaagccggtgatacccaggccgatgagcatgaagacagcatccagctgatgacc
ttgcacagcgccaagggcctggagtttccgtatgtgttcttggtgggcatggaagaaggc
ctgttcccgcacaagatgagcctggaagagcccggccgccttgaggaggaacgtcgcctg
gcctacgttggcatcacccgcgcaatgcagaacctggtgatgacctacgccgaaacccga
cgcctttacggcagcgagacctacaacaaggtttcgcgtttcgtacgtgaagtgcctaaa
ggcctgatccaggaagtgcgcctctccaacagcgtcagccgcccgttcggcgggggccag
cagcagcactccagccacctgttcgccggttccgagattccgcaaaccccgttcagcctc
ggccagcaggtcaagcattcggtgtttggcgagggcgtgatccttaacttcgaaggtgcc
ggcgcccaggctcgcgtgcaggtgaacttcgccgaaggcagcaagtggctgatgatgggt
tacgccaaacttgaggctgtctga
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