Pseudomonas asgharzadehiana: KSS96_04335
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Entry
KSS96_04335 CDS
T07697
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pasg
Pseudomonas asgharzadehiana
Pathway
pasg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pasg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KSS96_04335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pasg03021
]
KSS96_04335
Transcription machinery [BR:
pasg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KSS96_04335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
PhyR_sigma-like
HTH_23
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
QXH68172
LinkDB
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Position
complement(979551..980075)
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AA seq
174 aa
AA seq
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MTHVALASSSVRQTVLHSLFGDHHGWLLSRLRARLGCTYDAADMAAEVFAQVVALSEPQA
IREPRALLTTIAKRLMYDTWRRRDLERAYLEVLALQPEAFAPSPEAHALAIEALLEIDTL
LAGLSSRARTAFLCSQVDGMKYADIAELIGVSTIRVRQYVAKGLKLCCQQLRHE
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgacccacgttgcgctcgcttcttccagtgttcggcagacggttctgcacagtcttttt
ggcgaccaccacgggtggctgctcagccgcctgcgggcgcggcttggttgtacttatgat
gccgctgacatggctgccgaagtgtttgcgcaggttgtcgccttatccgagccgcaggcg
atacgcgaacccagggcgctgctgaccaccattgccaagcgcttgatgtatgacacttgg
cgccgacgcgatctggagcgcgcctacctggaagtgttggcgttgcaacccgaagccttc
gccccctcccctgaagcccacgccctggcaattgaagcattgcttgaaatcgataccttg
ctggcaggcctttcgtcgcgggcccgtaccgcatttctgtgcagccaggtagacggtatg
aagtatgccgacattgccgagctgatcggcgtctcgactatccgggtgcgccaatacgtg
gccaagggtttgaagctgtgctgccagcagctgaggcacgaatga
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