Pseudomonas asgharzadehiana: KSS96_06085
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Entry
KSS96_06085 CDS
T07697
Name
(GenBank) signal peptide prediction
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pasg
Pseudomonas asgharzadehiana
Pathway
pasg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pasg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KSS96_06085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pasg02000
]
KSS96_06085
Transporters [BR:
pasg02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
KSS96_06085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
QXH68498
UniProt:
A0ABX8P3P3
LinkDB
All DBs
Position
1338404..1339576
Genome browser
AA seq
390 aa
AA seq
DB search
MITLRVLGTSVTLLETLRVRAEQELGIRLVYQVHDVEQAQRIAVMQPDSYDLYDQWFHNV
DFVWPARAIQPIDTRRIALWHEINDLPKRGRLSPHDRLGSGSVPSERLFVQHDGSLGSTV
TERISMLPLTHNADSFAYRPERLPEGFCHGNESWGWLLDPAWRARTALQSDAAIGALDAA
LAVQGAGLAHFRDIGNMSIEEIDVLADILVRKQKGGHFAAFWSDDEEAAQLMLSPSIDIQ
SLWSPTLMRLHRAGVKYRLAVPREGYRAWFGGLSLSRHAQGPVLDAAYAYLNWWLSGWPG
AVMARQGYYIGNPARSRDHLSSAEWDYWYAGLPAREELVGSDDLPLIDIGEVRDGGSYEQ
RMGHIAVWNSVMDEHNYLVRRWGDFMRARG
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgatcacactgcgcgtcctgggtacctcggtgaccctgctcgaaaccttgcgcgtgcgc
gccgaacaggaactgggcattcgcctggtctaccaggtgcatgacgtcgaacaggcccag
cgcatcgcggtgatgcagcccgacagctatgacctgtacgaccagtggtttcacaacgtc
gacttcgtgtggccggcgcgggcgatccagcccatcgacacccggcgtatcgccttgtgg
catgagatcaacgacctgcccaagcgcggtcgcctgtcaccccatgaccgtttgggcagc
ggcagcgtgcccagcgaacgcctgttcgtgcagcacgacggcagcctgggcagcacggtt
accgaacgcatcagcatgttgcccctgacccacaacgccgacagtttcgcctaccgccca
gagcgcttgcccgagggtttttgccacggcaacgagagctggggctggctgctggacccg
gcctggcgcgcgcgcaccgcattgcaaagcgatgccgccatcggtgcgctggatgccgcg
ctggcggtgcagggcgcggggttggcgcacttcagggacatcggcaatatgagcatcgaa
gagatcgatgtgctcgccgatatcctggtgcgcaaacaaaagggcggccacttcgccgcg
ttctggtcggacgatgaggaggctgcgcaattgatgctcagccccagcatcgatatccag
agcctgtggtcgccgaccttgatgcgcctgcatcgcgcgggcgtgaaataccgcctggcg
gtgccccgcgagggctatcgcgcctggttcggtggcttgtcactgtcgcgtcatgcccaa
ggcccggtgctggatgcggcgtatgcgtacctcaattggtggctgtccggctggcccggc
gcggtgatggcgcgccagggttactacatcggcaacccggcgcgcagccgcgaccacctg
agcagcgccgaatgggactactggtacgccggcctgcctgcgcgggaagaactggtgggc
agcgacgatttgccgttgatcgatatcggcgaagtgcgcgatggcgggtcgtacgaacag
cgcatggggcatatcgccgtgtggaactcggtgatggatgaacacaactatctggtgcgg
cgctggggggactttatgcgcgcccgtggctga
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