Pseudomonas asgharzadehiana: KSS96_06325
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Entry
KSS96_06325 CDS
T07697
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
pasg
Pseudomonas asgharzadehiana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
AAA_16
AAA_19
TIP49
AAA_22
IstB_IS21
AAA_18
MCM
OKR_DC_1_N
APS_kinase
HTH_30
DUF3410
Motif
Other DBs
NCBI-ProteinID:
QXH68546
LinkDB
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Position
1403452..1404852
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AA seq
466 aa
AA seq
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MTHNILVVDDEPKLCDLLASALGQNGIQVFIAGNGLHALKVLEQEAIDLVISDWRMPGMD
GPALLAEIKVRYPHVPVIVMTAYSTVKNAVQSMRNGAYDYIAKPFDIDELDITVAKALQF
RDILRDNARLRAELDEHAQFDSLVGDSPAFRKVLHAVDSVRDSSATILLTGESGTGKEMV
ARAIHKHGCRADQPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVGRFMQADKGTLF
LDEVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLDAVANKEFREDL
YYRLNVFPIPLPALRERVEDIAPLARHFAQTLSATAGKRITGFSAEALQAMAAYHWPGNI
RELQNCVERATIVAASPLIEDIDLPGYLFASKPSGAGGVAAVLSDGPGIPQDLDAALAEV
EKAYILAALHESNGVQAAAAAKIGISERSFWYRLKKLGIQVDKIVR
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgacgcataacattctggtagtcgatgacgaacccaagctgtgcgacctgctggcatcg
gccctgggccagaacggcatccaggtgtttatcgccggcaacggcctgcacgcgctcaag
gtgctggagcaggaagccatcgacctggtgatcagcgactggcgcatgccaggcatggac
ggcccggcgctgctggccgagatcaaagtgcgctacccccatgtgccggtgatcgtgatg
accgcctacagcaccgtcaagaacgccgtgcagtcgatgcgtaacggcgcctatgactac
atcgccaagccgttcgatatcgacgagctggacatcaccgtggccaaggccctgcaattt
cgcgacatcctgcgcgacaacgcccgcctgcgcgccgaattggacgaacacgcacagttc
gacagcctggtgggcgatagcccggcgtttcgcaaggtgctgcacgcggtggactcggtg
cgcgacagcagcgccaccatcttgctgaccggcgaaagcggcaccggcaaggaaatggtc
gcccgggctatccataagcatggctgccgcgccgaccagccctttgtcgccgtcaactgc
gcggcgatccccgaaggcctgctggaaagcgagatgttcggccatcgcaagggcgcgttt
accggcgccgtggctgatcgggtagggcgctttatgcaggccgacaagggcacgctgttt
cttgacgaggtcggtgacatgccactggcgttgcaagccaagatcctgcgtgccttgcag
gagcgagtgatcgagccggtgggcgacccgcgcgagcgcaaggtggatgtgcgggtgatc
gccgccaccaacaagaatttgctggatgcggtggccaacaaggagtttcgcgaagacctg
tattaccgcctcaatgtgttcccgatcccattgccggccttgcgcgaacgcgtggaagac
atcgcgccgctggcccggcatttcgcccagaccctcagcgccaccgccggcaaacgcatc
accggtttcagcgccgaggcgttgcaggccatggcggcgtaccactggccgggcaatatc
cgcgagctgcaaaactgcgtggaacgcgcaaccattgtggcggcatcaccgctcatcgag
gatatcgacttgccgggttacctgtttgcatccaagccgagcggggcgggcggtgttgcg
gcggtgttgagcgacgggccggggatcccccaagacctggacgcggcgctggcggaggtg
gagaaggcctatattctggcggcattgcacgagagcaacggcgtgcaggccgcggcggcg
gcgaagatcggaatttcggagaggagcttctggtatcgcttgaaaaagctcggtatccag
gtggacaagatcgttcgctga
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