Pseudomonas asgharzadehiana: KSS96_06840
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Entry
KSS96_06840 CDS
T07697
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pasg
Pseudomonas asgharzadehiana
Brite
KEGG Orthology (KO) [BR:
pasg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pasg03009
]
KSS96_06840 (rimO)
Enzymes [BR:
pasg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
KSS96_06840 (rimO)
Ribosome biogenesis [BR:
pasg03009
]
Prokaryotic type
ribosomal protein modification factors
KSS96_06840 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Matrix_Paramyxo_N
DUF730
Motif
Other DBs
NCBI-ProteinID:
QXH69982
LinkDB
All DBs
Position
complement(1493316..1494644)
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AA seq
442 aa
AA seq
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MAKANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDSAKAE
SLEVIGEAIKENGKVIVTGCMGVEEGNIRNVHPSVLAVTGPQQYEQVVNAVHDVVPPRQD
HNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDEAQRL
VKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSSLGVWVRLHYVYPY
PHVDELIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKNWRQICPELIIR
STFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANLLDLAVVPDDVKQDRW
ERFMAHQQAISSARLQLRIGKEIEVLIDEVDEQGAVGRCFFDAPEIDGNVFIDDASGLKP
GDKVWCTVTDADEYDLWAEKRA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atcgcaaaagccaaccccaaggttggctttgtttccctgggttgcccgaaggcgctcgtc
gactccgagcgcatccttacgcaactgcgtatggaaggctatgacgtcgtgtccacttac
caggacgccgatgtggtggtggtcaacacctgcggtttcatcgactcggccaaggctgag
tcgctggaagtgatcggcgaagcgatcaaggaaaacggcaaggtcatcgtgaccggctgc
atgggcgtggaagaaggcaatatccgcaacgtgcaccccagcgtgctggcggtgaccggc
ccgcagcagtacgagcaggtggtcaacgccgtgcacgacgtggtgccgccgcgccaggac
cacaacccgctgatcgacctggtgccgccgcaaggcatcaagctgacgccacgccactac
gcgtacctgaagatttccgaaggctgcaaccacagctgcagtttctgcatcatcccgtcg
atgcgcggcaaactggtcagccgcccggtgggcgatgtgctggacgaggcccagcgcctg
gtcaaatccggcgtcaaagagctgttggtgatctcccaagacaccagcgcctacggcgtc
gacgtgaaataccgcaccggtttctggaacggcgcgccggtgaagacccgcatgaccgaa
ctgtgcgaagccctcagcagcctgggcgtgtgggtgcgcctgcattacgtttacccgtac
ccgcacgtcgatgagctgattccgctgatggccgctggcaagatcctgccgtacctggac
attccgttccagcacgccagcccgaaagtgctcaaggccatgaaacgcccggccttcgaa
gacaagaccctggcgcgcatcaagaactggcgccagatctgccctgagctgatcatccgc
tccaccttcatcgtcggcttccccggcgaaaccgaagaagacttccagtacctgctggac
tggctgaccgaggcccagttggaccgcgtcggctgcttccagtattcgccagtggaaggc
gcccccgccaacctgctggacctggccgtggtgccggacgacgtcaagcaagaccggtgg
gaacgcttcatggcgcaccaacaggcgatcagctcggcgcgcctgcaactgcgcatcggt
aaggaaatcgaagtattgatcgacgaagtcgacgagcaaggtgccgttggccgctgcttc
ttcgacgcgccggaaatcgacggtaacgtgtttatcgacgacgccagcggcttgaagccg
ggcgacaaggtgtggtgcacggtgaccgatgccgacgagtacgacttgtgggcggaaaaa
cgcgcctga
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