Pseudomonas asgharzadehiana: KSS96_07295
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Entry
KSS96_07295 CDS
T07697
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pasg
Pseudomonas asgharzadehiana
Brite
KEGG Orthology (KO) [BR:
pasg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pasg03016
]
KSS96_07295 (truD)
Enzymes [BR:
pasg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
KSS96_07295 (truD)
Transfer RNA biogenesis [BR:
pasg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KSS96_07295 (truD)
Prokaryotic type
KSS96_07295 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QXH68731
LinkDB
All DBs
Position
1594343..1595401
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AA seq
352 aa
AA seq
DB search
MNDLQLLGPRAYGEALGSAVLKATAEDFQVDEVLDIPLTGDGEHLWLWVEKRGLNTEEAA
RRIAKAAGVPLRTVSYAGLKDRQALTRQWFSVQLPGKADPDMKGAENDTLKILKTARHRR
KLQRGAHSANGFTLRLTQLAGDTAAIDARLQQIAQHGIPNYFGAQRFGHNGGNVVDAREW
AARKALPEQRNVRSRLLSTARSFLFNKVLAARVADGSWQRAQVGDLLAFTDSRSFFPAGE
AECSDPRLAILDLHPTGPQWGEGDSPATGATHELEQAIAASEADLRDWLVNAGMSQERRI
LRLPIGGLTWHYPGPDILQLEFVLPAGCFATVLVRELVDLVPVGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatctgcaactgttgggcccgcgagcctatggcgaagccttgggcagcgccgtc
ctgaaggccaccgctgaagatttccaagtggacgaagtgctggatatccccctgaccggc
gacggcgagcacctgtggttatgggtggaaaaacgtggcctcaacaccgaggaagccgcg
cgccgtatcgccaaggccgccggcgtgccgttgcgcaccgtcagctatgcggggctcaag
gatcgccaggcgctgacccgccagtggttcagcgtgcagttgccgggcaaggctgacccg
gacatgaagggtgccgaaaacgacactctcaagatccttaaaaccgctcgccacaggcgc
aagctgcaacggggcgcgcattcggccaatggtttcaccctgcgcctgacccagttggcc
ggcgataccgccgccatcgacgcacgcttgcaacagattgcacaacacggcatccccaat
tacttcggcgcccagcgttttggccataacggcggtaacgtggttgacgcccgtgagtgg
gccgctcgcaaggctttgcccgaacagcgcaatgtgcgttcgcgactgttgtccaccgcg
cgcagttttctctttaataaggtgctggccgcacgcgtggccgacggttcgtggcaacgg
gcccaggttggcgacttgctggcatttaccgacagccgcagttttttcccggctggcgaa
gctgaatgcagcgacccgcgcctggcaatcctggacctgcacccgaccgggccgcagtgg
ggggagggcgattcgcccgcaaccggcgcgacccatgaacttgagcaggcgatcgccgca
agcgaagccgatctgcgtgattggctggtgaatgccggcatgagccaggaacgtcgcatt
ctgcggctgcccattggcgggttgacgtggcattatcccgggcctgacattctgcaattg
gaattcgtcctgccggccggatgcttcgccactgtcttggtgcgcgagcttgttgatctg
gtgccggtggggcagacggacagcccatgcgtattctga
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