Pseudomonas asgharzadehiana: KSS96_07570
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Entry
KSS96_07570 CDS
T07697
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pasg
Pseudomonas asgharzadehiana
Brite
KEGG Orthology (KO) [BR:
pasg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pasg03021
]
KSS96_07570 (rapA)
Transcription machinery [BR:
pasg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
KSS96_07570 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QXH68783
UniProt:
A0ABX8P4H0
LinkDB
All DBs
Position
complement(1651207..1654053)
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGDTRQYALRNAPLTRVRFSPG
DSITHFEGWKMTVQEVDDVDGLLVYHGLNGQNEQVTLPETQLSNFIQFRLASDRLFAGQI
DPLAWFSLRYHTLEHTSRQLQSSLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRANRVLILVPENLQHQWLVEMRRRFNLQVALFDEERFIESDA
ANPFEDTQLALVALEWLVDDEKAQDALFAAGWDLLVVDEAHHLVWHEEKASAEYALVEQL
AEVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLQAFRAESENYRPVAEAVQELLDK
GRLSPAAHKTIQGFLGNEGEALLSAVNDGDTEAGARLVRELLDRHGTGRVLFRNTRAAVQ
GFPERKLHAYPLPNPDEYLELPLGEHAELYPEVSFQSQPDIEEENRWWRFDPRVEWLIDQ
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFAHHLVLFDLPSHPDLLEQRIGRLDRIGQKHVIELHVPYLETSP
QERLFQWYHEALNAFLNTCPTGNALQHQFGPRLLPLLESADDGEWQALIDEARAERERLE
QELHTGRDRLLELNSGGAGEGDALVEDILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPPAALRCLLDTNGNDLSGRVSF
ETLNDQLESVPRASANKFVQAQRDQLTPRINAGEEKITPRHAERVAEAKRRLAADTDEEL
ARLSALQAVNPTVRDSELVALRHQREQGLAMLDKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggattagtgacagcgaagcagagctgggg
ttaggcaccgttctggcacaggacggccgcttgttgaccgtgctctatccggccactggc
gacactcgccagtatgcgctacggaatgcgcccctgacccgcgtgaggttctcgccgggc
gactccatcacccatttcgaaggctggaaaatgaccgtacaggaagtcgacgacgtcgac
ggcttgctggtctaccacggcctcaacgggcagaacgagcaggtcaccctgccggaaacc
cagctctccaacttcatccagttccgcctggccagcgaccgtctgttcgccgggcagatc
gacccgctggcctggttctcgctgcgctaccacactctggagcacaccagccgccaattg
cagtcctcgctgtggggcctgggtggcgtgcgtgcgcaacctattgcccaccaactgcac
atcgcccgcgaagtggctgaccgcatcgcgccacgggtgttgctggccgacgaagtgggc
ctgggcaagaccatcgaagccggcctggtcatccaccgccagttgctgtcgggccgcgcc
aaccgtgtgttgatcctggtaccggaaaacctgcagcaccaatggctggtggaaatgcgc
cgccgcttcaacctgcaggttgcgttgttcgatgaagaacgctttatcgaaagcgatgcc
gccaacccgttcgaagacacccagttggccctggtggccctggaatggctggtggacgat
gagaaggcccaggacgcgctgttcgccgccggctgggacctgctggtagtcgacgaggcc
caccacctggtctggcatgaagaaaaggccagcgcggaatacgcactggtggagcaactg
gccgaggtgattcctggcgtgctgctgctcaccgctactccggagcaactgggccaggac
agccacttcgcgcgcctgcgcctgttggatccgaaccgtttccatgacctgcaagccttc
cgcgccgaaagcgaaaactatcgcccggtggccgaagccgtgcaggaactgctcgacaaa
ggccgcctgtcaccggcggcgcacaagaccatccagggtttcctcggcaacgaaggcgaa
gcgctgctcagcgccgtcaacgatggcgacaccgaagccggtgcacgcctggtgcgtgag
ctgctcgaccgccacggcaccggccgcgtgctgttccgcaatacccgcgccgccgtgcaa
ggcttccccgagcgcaagctgcacgcctacccgctgccgaacccggacgaatacctggaa
ctgccactgggcgaacacgccgagctgtacccggaagtcagcttccaatcgcagccggac
atcgaggaagaaaaccgctggtggcgcttcgacccacgggtggagtggctgatcgaccag
ctgaaaatgctcaagcgcaccaaggtgctggtgatctgcgcccacgccgaaaccgccatg
gacctggaagacgccctgcgcgtgcgttccggcatcccggccacggtgttccacgagggc
atgaacatcctcgaacgcgaccgcgcggcggcctactttgccgatgaagaattcggcgcc
caggtgctgatctgctcggaaatcggcagcgaaggtcgcaacttccagttcgcccaccac
ttggtgctgttcgacctgccgtcgcaccccgacctgctggaacagcgcatcggccgtctg
gaccggatcggccagaagcatgtgatcgaattgcacgtaccgtacctggaaaccagcccg
caagagcgcctgttccagtggtaccacgaagcgctgaatgcgttcctcaacacctgcccg
accggcaacgccctgcagcatcagtttgggccacgcctgttgccgctgctggaaagcgcc
gacgacggcgagtggcaagccctgatcgacgaagcccgcgccgagcgtgagcgcctggag
caggaactgcacactggtcgcgaccgcctgctggagcttaattccggcggcgcgggtgaa
ggcgatgcgctggtcgaagacatccttgagcaggacgatcagttcgccctgccgatctat
atggaaaccctgttcgacgcgttcggcatcgacagcgaagaccactcggaaaatgcactg
atcctcaagccgagcgaaaaaatgctcgacgccagcttccccctgggcgacgacgaaggc
gtgaccatcacctacgaccgtaaccaggcgctgtcacgcgaagacatgcagttcatcacc
tgggaacacccgatggtgcagggcggcatggacctggtgttgtccggctccatgggcaac
accgccgtggcgctgatcaagaacaaggcgctcaagccgggcaccgtattgctcgaactg
ctctacgtcagcgaagtggttgcgccgcgctcgctgcaactgggccgctacctgccgccg
gctgcgctgcgctgcctgctggacaccaacggcaatgacctttccggccgcgtctcgttc
gaaaccttgaacgaccaactcgaaagcgtgccccgcgccagcgccaacaagttcgtacag
gcccaacgcgatcaactcaccccgcgcatcaacgccggtgaagagaagatcaccccgcgc
cacgccgaacgcgtggccgaggccaagcgccgcctggcagcggacaccgacgaagagctg
gcacgcctgagcgccttgcaagcggtcaacccgaccgtgcgtgacagcgaactggttgcc
ctgcgccaccaacgcgagcaaggcctggccatgctcgacaaggcagcgctgcgactggaa
gcgattcgggtgctggtggcgggttga
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