Pseudomonas asgharzadehiana: KSS96_08210
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Entry
KSS96_08210 CDS
T07697
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pasg
Pseudomonas asgharzadehiana
Brite
KEGG Orthology (KO) [BR:
pasg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pasg03016
]
KSS96_08210 (rnd)
Enzymes [BR:
pasg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
KSS96_08210 (rnd)
Transfer RNA biogenesis [BR:
pasg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KSS96_08210 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
QXH68901
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All DBs
Position
1777979..1779112
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AA seq
377 aa
AA seq
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MAIDIHWICDNDSLGQHCAEWQQLPFVALDTEFMRVDTFYPIAGLIQIGDGARAYLIDPL
TIDNWQPLAALLENPAVIKVVHACSEDLEVLLRLTGSLPVPLFDTQLAAAYLNLGFSMGY
SRLVQAVLDIELPKGETRSDWLQRPLSETQISYAAEDAVHLAEVYIRLRPQLSDDKYAWV
LEDGAELVANLRREVDPYEVYRDAKLAWKLSRAQLAVLRELCAWREQQARARDLPRNRIV
REHSLWPLAKSQPDNLAALGKIEDMHPRTVRQDGQFLLDLIKRAGSLPMDQWPPAVAEPL
PVDAAALIKQLRALGQTFAERLDMAPELMLRKKTLEALVKSGYPDGPYQLPDSLRGWRRE
LMGQALLDSLATAGEQP
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtggccatcgatattcactggatctgcgacaacgatagcctcggccagcactgcgccgaa
tggcagcagttgccattcgtcgccctcgacaccgaattcatgcgggtcgacaccttttat
cccattgccgggttgatccagatcggcgatggcgcacgcgcttacctgatcgatcccctg
accattgacaactggcaacccttggccgcgctgctggaaaacccagcggtgatcaaggtg
gtgcacgcctgcagcgaagacctcgaagtcttgctgcgtctgaccggcagcctgccggtg
ccgttgttcgacacccaattggcggcggcttacctgaacctcggcttttccatgggctat
tcgcgcctggtgcaagccgtgctcgacatcgaactgcccaagggtgagacgcgttcggac
tggttgcagcggccattgtccgagacgcaaatcagctacgccgccgaagacgcggtgcat
ttggccgaggtctacattcgcctgcgcccgcagctgtccgacgacaaatacgcctgggtg
ctggaggacggtgccgaactggtggccaacctgcgccgcgaagtcgacccgtacgaggtg
taccgcgacgccaagctggcctggaaactgtcccgcgctcaacttgccgtgctgcgagag
ctgtgcgcctggcgcgagcagcaagcccgcgcccgcgacctgccgcgcaaccgaatcgtt
cgcgagcactcgttgtggcccctggccaagtcccagccggacaacctcgccgcactgggc
aagatcgaagacatgcacccgcgcaccgtgcgccaggatggccagttcctgctggacttg
atcaaacgtgccggcagcctgcccatggaccaatggccgcccgccgtggctgaaccgctg
ccggtggatgccgccgcgctgatcaagcaactgcgtgccctgggccaaacgttcgccgag
cgcctggacatggcgccggaactgatgctgcgcaagaaaaccctcgaagccctggttaaa
agtggctaccccgatgggccttaccaattgccagactcgctgcgtggctggcgccgcgag
ttgatgggccaggcgctgctcgacagcctggccactgccggagaacagccttga
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