Pseudomonas asgharzadehiana: KSS96_08395
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Entry
KSS96_08395 CDS
T07697
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pasg
Pseudomonas asgharzadehiana
Pathway
pasg00071
Fatty acid degradation
pasg00280
Valine, leucine and isoleucine degradation
pasg00310
Lysine degradation
pasg00362
Benzoate degradation
pasg00380
Tryptophan metabolism
pasg00410
beta-Alanine metabolism
pasg00640
Propanoate metabolism
pasg00650
Butanoate metabolism
pasg00907
Pinene, camphor and geraniol degradation
pasg00930
Caprolactam degradation
pasg01100
Metabolic pathways
pasg01110
Biosynthesis of secondary metabolites
pasg01120
Microbial metabolism in diverse environments
pasg01200
Carbon metabolism
pasg01212
Fatty acid metabolism
Module
pasg_M00087
beta-Oxidation
pasg_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pasg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
KSS96_08395 (fadB)
00650 Butanoate metabolism
KSS96_08395 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
KSS96_08395 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
KSS96_08395 (fadB)
00310 Lysine degradation
KSS96_08395 (fadB)
00380 Tryptophan metabolism
KSS96_08395 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
KSS96_08395 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
KSS96_08395 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
KSS96_08395 (fadB)
00930 Caprolactam degradation
KSS96_08395 (fadB)
Enzymes [BR:
pasg01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
KSS96_08395 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
KSS96_08395 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
KSS96_08395 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
KSS96_08395 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QXH68938
UniProt:
A0ABX8P4V9
LinkDB
All DBs
Position
1815113..1817260
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AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADFRVMAATAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENKAEDAL
KVGAVDAVVAPDKLAEAALNLIKGAISGEFDYKAKRQPKLEKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEAQVK
DDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYDAKRLGQKNGKGFYAYEADKKGKQ
KKVADPSVHEVLAPVIYEQREVSDEDIINWMMIALCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGPLYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaaattcaatcgtctaaccctgaacgaactg
cgtcaggccgtagacgccatcaaagcagatgcttcggtcaagggggtgatcgtttccagc
ggcaaggacgtgttcatcgtcggcgctgacatcaccgaattcgtcgacaacttcaagctg
cccgatgccgagctggtggctggcaacctcgaagccaacaagattttcagcgatttcgaa
gacctcaatgtgccgaccgttgccgccatcaatggcatcgcactgggcggcggcctcgaa
atgtgcctggcggcggattttcgcgtcatggcggccactgccaaaatcggcctgcctgaa
gtcaagctgggcatctacccaggttttggcggcaccgtgcgcctgccacgcctgattggc
gcggacaacgcgatcgagtggattgccgccggcaaggaaaacaaagcggaagacgcgctg
aaagtcggtgccgtcgacgctgtggttgccccggacaaactggccgaagccgcgcttaac
ctgatcaagggtgccatcagcggcgaatttgactataaggccaagcgtcagccgaagctg
gaaaaactcaagctcaacgccatcgaacaaatgatgtcgttcgagaccgccaaaggtttc
gtggctggccaggccggcccgaactacccggcgccggttgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgcgacaaagccctggaagtagaagcggcaggcttcgtcaaa
ctggcgaaaacctcggctgcccaaagcctgatcggcctgttcctgaacgatcaggaactg
aagaaaaaagccaaggcctacgacgaaatcgccaaagacgtgaaacaggccgccgtgctc
ggcgccgggatcatgggcggcggtatcgcctatcagtcggcgtccaaaggcacgccgatc
ctgatgaaggacatcaacgagcacggcatcgagcagggcctggcggaagccgccaaactg
ctggtgggccgcgttgataaaggtcgcatgactgctgcgaaaatggccgaagtgcttaac
ggtattcgtcctacgctgtcctacggcgatttcggtcatgtcgacctggtggtcgaagcg
gttgtcgagaacccgaaggtcaagcaggccgtgctggctgaagtggaagcccaggtcaaa
gacgacaccatcctggcctccaacacctcgaccatttccatctcgctgctggccaaggct
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgagctggccgttgccactaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgactgcccgggctttctggtc
aaccgcgtactgttcccgtacttcggcggtttcgccaagctggtcagtgccggcgtggac
tttgtgcgtatcgacaaggtcatggaaaaattcggctggccaatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggtcatcacggtcgtgacgtgatggctgaaggtttc
ccggaccgcatgaaggacgaccgtcgctcggctgtcgacgcactttacgacgccaagcgc
ctgggccagaagaacggcaagggtttctacgcctacgaggctgacaagaagggcaagcag
aagaaagttgctgacccgtcggtgcacgaagtactggcgccggttatctatgagcagcgt
gaggtgtccgacgaggacatcatcaactggatgatgatcgcactgtgcctggaaaccgtg
cgttgcctggaagacggtatcgtcgagaccgccgccgaagccgatatgggcctggtgtac
ggtattggtttccctccattccgtggcggtgcgctgcgttacatcgactcgatcggtgtg
gctgaattcgttgccctggctgatcaatacgctgatttgggcccgctgtaccacccgacc
gcgaagctgcgtgaaatggccaagaacggccagagcttcttcggttaa
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