Pseudomonas asgharzadehiana: KSS96_12475
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Entry
KSS96_12475 CDS
T07697
Symbol
rtcR
Name
(GenBank) RNA repair transcriptional activator RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
pasg
Pseudomonas asgharzadehiana
Brite
KEGG Orthology (KO) [BR:
pasg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pasg03000
]
KSS96_12475 (rtcR)
Transcription factors [BR:
pasg03000
]
Prokaryotic type
Other transcription factors
Others
KSS96_12475 (rtcR)
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Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
Mg_chelatase
AAA
AAA_16
AAA_22
NACHT
AAA_30
ATPase_2
AAA_19
AAA_7
ABC_tran
AAA_2
TniB
BrxC_BrxD
AAA_14
AAA_33
MCM
Motif
Other DBs
NCBI-ProteinID:
QXH69687
LinkDB
All DBs
Position
complement(2709254..2710834)
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AA seq
526 aa
AA seq
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MKHKRTVAIGFIGSKLDRVGKGANRWNHWRPSVGLCQQDDLQIDRLELIHDVDARDVSLA
ERVRADIQQISPHTEVRLHPMPLANPWDFEEVYGALHDFTSAYRFDTEREDYLVHITTGT
HVAQICWFLLTEARTLPARLIQTSPSRRLDADAPATGTHTLIDLDLSRYDRIASRFAHQR
LEGLAFLKSGIATRNPAFNASIEQIERVAVRSTAPMLLIGPTGAGKSFLARRIYELKRSR
HQLQGRFVEVNCATLRGDGAMSALFGHIKGAFTGAQNARDGLLRAAHGGMLFLDEIGELG
LDEQAMLLKAIEEKRFYPMGADTEVASDFLIIAGTHRDLRERVADGLFREDLYARINLWT
FDLPGLAGRREDIEPNLDFELERHAREQGRRVRFNLEARRRYLAFACSSEAAWLGNFREL
SASITRMATLADSGRIDQAQVEEEIQRLRYAWGISAPHACLPADLDLFDQLQLKAVIDVC
LQADSLSDAGRRLFGVSRQAKAQPNDADRLRKYLARFSIDWKQLKP
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacaagcgcacggtcgccatcggatttatcggttccaagctggatcgcgtcggc
aagggcgccaatcgctggaaccactggcgccccagcgtcgggctgtgccagcaggatgat
ctgcagatcgaccgcctggaactgatccacgacgtcgacgcccgcgatgtcagccttgcc
gagcgagtgcgcgccgacatccagcagatctcgccccacaccgaggtgcgcctgcacccg
atgccgctggccaatccctgggatttcgaagaggtgtacggcgcgttgcacgacttcacc
agtgcctaccgcttcgacaccgagcgcgaggattacctggtgcatatcaccaccggcacc
cacgtggcgcagatttgctggttcctgctcaccgaagcgcgcaccttgccggcccgcctg
atacaaacctcccccagccgacgcctggatgccgacgcacccgccaccggcacccacacc
ctgatcgacctcgacctgtcgcgctacgaccgcatcgcttcgcgtttcgcccaccagcgc
ctggaaggcctggcgtttctcaaatccgggatcgccacacgcaaccctgcgttcaacgct
tccatcgaacagatcgaacgcgtggccgtgcgctccaccgcgccgatgctgttgatcggc
ccaaccggggccggtaaatccttcctcgcccggcgcatctacgaactcaagcgcagccgc
catcaactgcagggccgcttcgttgaggtgaactgcgccaccctgcgcggcgatggcgcc
atgtccgcgctgttcgggcatatcaagggcgccttcaccggcgcgcaaaacgcccgcgac
ggcctgttgcgcgccgcccacggtggcatgctgttcctcgatgaaatcggcgaactgggc
ctcgacgaacaggccatgctgctcaaggccattgaagaaaaacgcttctacccgatgggc
gccgacaccgaagtggccagcgacttcctgatcatcgccggcacccaccgcgacctgcgc
gagcgggtcgccgacgggttgtttcgcgaagacctctacgcgcgcatcaacctatggacc
ttcgacctgcccggcctggcgggccgccgcgaagacatcgagccgaacctcgacttcgag
ctggagcgccacgcccgcgaacaaggccgtcgcgtacgtttcaacctggaagcgcggcgc
cgctacctggcgtttgcctgctccagcgaagcggcgtggctgggcaattttcgcgaactg
tccgcctccatcacacgcatggcgaccctggccgacagcgggcgtatcgatcaagcccag
gtcgaggaagaaatacagcgcctgcgttatgcctggggcatcagcgcaccccacgcgtgc
ctgccggccgacctggatctgtttgaccagctacaactcaaagccgtcatcgacgtatgc
ctgcaagccgacagcctgtccgatgcaggccgacgcttgtttggcgtctcacgccaggcc
aaggcgcaaccgaacgatgcggatcggctgcgcaaatacctggcgcggttttcgattgac
tggaagcagttgaagccgtag
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