Pseudomonas asgharzadehiana: KSS96_13370
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Entry
KSS96_13370 CDS
T07697
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
pasg
Pseudomonas asgharzadehiana
Pathway
pasg02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pasg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
KSS96_13370 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pasg02044
]
KSS96_13370 (tssC)
Secretion system [BR:
pasg02044
]
Type VI secretion system
Imp/Vas secretion system core components
KSS96_13370 (tssC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
QXH69858
UniProt:
A0ABX8P7A8
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All DBs
Position
2946474..2947949
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AA seq
491 aa
AA seq
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MSIKQNPITAHTADDCSILDNIIAQTLLSADDEAYGIAKRGVSAFIEELIKPQNSGEPVK
KRLVDRMIAEIDEKLSRQMDEILHCPQFQALEAAWKGLQLLVERTNFRENIKIELLNVSR
QDLLDDFEDSPEVTQAGLYKHVYSAEYGQFGGQPVGAIIANYFLSPSAPDVKLMQYVSSV
ACMAHAPFIAAAGPAFFGLESFTGLPDLKDLRDHFEGPQFAKWQSFRQSEDARYIGLTVP
RFLLRTPYDPLECPVKTFAYRENVVNSHEHYLWGNTAYAFATRLTDSFARFRWCPNIIGP
QSGGAVEDLPLHHFHSMGEIETKIPTEVLVSDRREYELAQEGFIALTMRKGSDNAAFFSA
SSVQKPKNFGISAEGKEAELNYRLGTQLPYMMVVNRLAHYLKVLQREQLGSWKERTDLEL
ELNKWIRQYVADQENPSAEVRGRRPLRAARIVVSDVEGEPGWYRVNLSVRPHFKYMGADF
TLSLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcattaaacagaacccgatcactgcccacaccgctgatgattgcagcatcctcgat
aacatcattgcgcaaacgctgctcagcgccgacgacgaggcctatggtattgccaagcgt
ggcgtctcggcatttatcgaagaattgatcaaaccgcaaaacagcggtgaaccggtcaag
aaacgcttggttgaccggatgatcgccgagattgacgaaaagctcagccggcagatggat
gagattttgcactgcccccaattccaggctttggaagcggcctggaaagggcttcagctg
ttggtcgagcgcaccaactttcgcgagaacattaagatcgagctgctgaacgtctcacgg
caagacctgctcgatgactttgaagactcgccggaagttacccaggcggggctctacaag
catgtctacagcgccgaatatggtcagtttggcggccagccggtgggcgcgatcattgcc
aactattttctctctcccagcgccccggatgtgaaactgatgcagtacgtttccagcgtg
gcatgtatggctcacgcgccttttatcgccgccgccgggccggcttttttcgggttggaa
agcttcactggcctacctgacctgaaggacctcagggaccattttgaaggcccgcaattc
gctaaatggcagagctttcgccagagcgaagatgcccggtacatagggctgaccgtgcca
cgcttcctgctgcgcacgccatacgacccccttgaatgccccgtcaagacctttgcctat
agggaaaacgtggtcaacagccatgagcactacctatggggcaataccgcctacgcattt
gccacgcgtttaaccgatagtttcgcgcggttccgctggtgcccgaacatcattggcccg
caaagcggcggcgcggtggaagacttgccgttgcatcacttccacagcatgggcgaaatc
gaaaccaagattcccactgaagtgctggtctccgatcgtcgcgaatacgaactggcgcaa
gaaggcttcattgccttgacgatgcgcaagggcagtgacaatgcggcgttcttctccgcc
agctcggtgcagaagcccaagaatttcggcatcagtgccgagggcaaggaagccgagttg
aactaccgcttgggtacccaactgccctacatgatggtggtcaaccgcctggcccattac
ttgaaggtgctgcaacgcgagcaactgggctcgtggaaggagcgtaccgacctggaactg
gagctgaacaagtggattcgccaatacgttgcggaccaggaaaaccccagcgccgaagtg
cgcgggcggcgaccgctgcgcgcggcacgcatcgttgtcagtgacgtcgagggcgagcct
ggctggtaccgcgtcaatttgagcgtacgtccgcacttcaagtacatgggggccgacttt
acgctgtcgctggttggcaagctcgacaaagaatga
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