KEGG   Pseudomonas asgharzadehiana: KSS96_13395
Entry
KSS96_13395       CDS       T07697                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K11914  sigma-54 dependent transcriptional regulator
Organism
pasg  Pseudomonas asgharzadehiana
Brite
KEGG Orthology (KO) [BR:pasg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pasg03000]
    KSS96_13395
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pasg02044]
    KSS96_13395
Transcription factors [BR:pasg03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    KSS96_13395
Secretion system [BR:pasg02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   KSS96_13395
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 AAA_lid_14 HTH_8 HTH_30 AAA_5 HTH_28 AAA_2 AAA AAA_7 HTH_50 nSTAND3
Other DBs
NCBI-ProteinID: QXH69863
UniProt: A0ABX8P7A9
LinkDB
Position
2953558..2955090
AA seq 510 aa
MSDNLFAQLPHPLDYADVLLTWFARLGIDADETTLAQLCVTAAAQLSQCELAQLYWRDEV
TGRLDLIAQHLPGALALGEPASSHDFQHEQLLHYVLSQGHSLSLEDLANSVYESAFLPAA
RLPWQALSCVPLSGRRASVTGLLLCASQRPRSLQGHGPSLRLLGSFALNQLGVLKGLRLV
QSASPTKPGTPVARTAYGLIGNSTAMDETYRLIGKVLNTSYTVLLRGETGTGKEVVARAI
HASGPRSGKAFVVQNCAAFPEGLLESELFGYRKGAFTGAERNHAGLFDAAHGGTLLLDEI
GDMPLSLQAKLLRVLQEGEIRPLGASAAHKVDVRIIAATHRDLAAMVAEGSFREDLYYRL
AQFPIELPALRQRGGDVLLLAREFAQTACTALGCTSVQWSSAALDQLSSHAFPGNVRELK
CLVERAVLLCDDGVILPAHLCLSPAPTAMALDATLRQRLERVERVFLIDCLHKNRGNRTR
TARELGVARRTLLYRLARLNIPCSDARGEG
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgagcgacaatctgtttgcccaattgccccatcccttggactacgccgatgtgctgctc
acctggttcgctcgcttgggtatcgacgctgacgagaccacgttagcgcagctctgtgtg
acggctgcggcacaactaagccagtgcgaacttgcccaattgtattggcgcgacgaggtg
acagggcgcctcgacctgattgcccagcatttgcccggcgcactggcgcttggcgagccg
gcaagtagccatgacttccagcatgagcaattgctgcactatgtcctcagccagggccac
tctttgagcctggaggacctggccaacagcgtctacgaaagtgcctttctgccggccgcg
aggttgccctggcaggcgttgtcatgcgtgccattgtcggggcggcgcgcgagcgtgacg
ggcctgttgttatgcgccagccagcgtccccgatccttgcagggccatggcccgtcattg
cggttgctggggagtttcgccttgaaccagctgggcgttttgaaggggctgcgccttgtg
caaagcgcttccccgacaaaacctggcacgccggtcgcccggacggcgtatgggctgatc
ggcaacagcacagccatggacgaaacctaccgtttgattggcaaggtgctgaacacctcg
tacacagttttgctgcgcggcgagaccgggaccggaaaagaggtggtggcgcgggccatt
cacgccagcgggccgcgtagcggcaaagcctttgtggtgcagaactgcgccgcctttccc
gaagggttgctggaaagtgaactgtttggctatcgcaagggtgcgttcaccggcgccgag
cgtaaccatgcagggctgttcgacgccgcgcatggcggaacattgctgctggacgaaatc
ggcgatatgccgctgtcattacaggccaagttgctgcgggtgttgcaggagggcgaaatc
cgtccgttgggagccagtgcagcccacaaggtcgatgtgcgcatcatcgccgcgacccat
cgcgacctcgctgcaatggtggccgaaggcagcttccgtgaggatctctactaccgattg
gcgcaatttcccatcgaactgccggccttgcgtcagcggggcggtgatgtgttgctgttg
gcgcgagagttcgcgcaaacagcgtgtacggcactcggctgtacgtcggtgcagtggtcc
agtgcggccttggatcaactgtcgagccatgctttccccggcaatgtgcgcgaactcaaa
tgcctggtggaacgtgccgtactgctctgcgatgacggtgtgatcttgcccgcgcatttg
tgcctgtcgccagcgccgactgccatggccctcgatgcaacgttgcgccaacgcctggag
cgggttgagcgggtatttttgatcgactgcctgcacaagaaccgtggcaaccgaacccgc
accgcccgtgagttgggggttgcgcgccgcacgctgctgtaccgcctggcacgtctgaat
attccctgcagcgatgcccgaggggaaggctga

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