Pseudomonas asgharzadehiana: KSS96_13560
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Entry
KSS96_13560 CDS
T07697
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pasg
Pseudomonas asgharzadehiana
Brite
KEGG Orthology (KO) [BR:
pasg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pasg03400
]
KSS96_13560
DNA repair and recombination proteins [BR:
pasg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KSS96_13560
Archaeal homologous recombinant proteins
KSS96_13560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QXH69894
LinkDB
All DBs
Position
complement(3004953..3006194)
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AA seq
413 aa
AA seq
DB search
MRLFHTSDWHLGQNLHGQERDFEHACFLEWLLRQISDHHPDALLIAGDIFDTVNPPLKAQ
ERLYDFIISAHEQNPTLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGCVLWLDDGQLDA
ERLLIPLPDAKGKIAAWCLALPFLRPAQVTGAHLGDDYLRGIGQVHERLIAAANAKRKKG
QALIAVSHAHMAGGSVSQDSERSLVIGNAEALPASLFDKSVGYVALGHLHKPQKVNGEER
IRYSGSPIPLSFSEIGYKHQILDVTFQGQALVSVEPILIPRSVNLQRLEAAPLADILTQL
ADLPDVDLLAETQRHPWLEVRVRLDEPQPDLRQQIETALQGKAVRLVRIAAEYAGKRSSE
HPDDERLIELDQLTPQELFSRAWQDSYGSEVDEQTLQDFAVLLQEVQHQEEQP
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctgttccacacctccgactggcaccttggccaaaacctgcacggccaggaacgc
gacttcgaacatgcctgtttccttgagtggctgctgcgccagatcagtgaccaccacccc
gatgcgctgctgatcgccggcgatatattcgacacggtcaacccgccgctcaaggcccag
gagcgtctgtatgacttcatcatcagcgcccacgagcaaaaccctacgctgaccatcgtg
atgatcgccggcaaccacgactccggttcgcgtatcgagctgccggcgccgctgatgcgc
cgtttgcgcacccatgcgctcggttgcgtgctgtggctggatgacggccaactggatgcc
gagcgcctgctgattcccctgccggatgccaaaggcaagatcgccgcgtggtgcctggcg
ctgccgttcctgcgccccgcgcaagtgaccggcgcgcacctgggtgacgactatctgcgc
gggatcggccaggtgcacgagaggttgatcgccgccgccaacgccaaacgcaaaaaaggc
caggcgctgattgccgtcagccacgcgcacatggccggtggctcagtgtcgcaagactcc
gaacgcagcctggtcatcggcaatgccgaggcgctgccggccagcctgttcgacaaaagt
gtcggctatgttgccctcggccatttgcacaagccgcaaaaggtcaatggcgaagagcgc
attcgttacagcggctcgccgattccactgtcgttttccgaaatcggctacaaacaccag
attctcgacgtaacgttccagggccaagcgctggtcagcgtcgaacctatcctgattccg
cgctcggtcaacctgcaacgtctggaagcggcgcccctggccgatatccttacgcaattg
gccgacctgcccgacgtcgatctgctggccgaaacccagcgccatccctggctggaagtg
cgtgtgcgcctcgacgagccgcaaccggacctgcgccagcaaatcgaaaccgccctgcaa
ggcaaggccgtgcgcctggtgcgcatcgccgccgaatacgccggtaaacgaagcagcgag
cacccagacgacgaacgcttgatcgaactcgaccagctcacgccccaggagctgttcagc
cgcgcctggcaagacagctacggcagtgaagtggacgaacagaccttgcaggacttcgcc
gtgctgctccaggaagtgcaacaccaggaggagcagccatga
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