Pseudomonas asgharzadehiana: KSS96_16975
Help
Entry
KSS96_16975 CDS
T07697
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pasg
Pseudomonas asgharzadehiana
Brite
KEGG Orthology (KO) [BR:
pasg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pasg03000
]
KSS96_16975
Transcription factors [BR:
pasg03000
]
Prokaryotic type
Helix-turn-helix
Other families
KSS96_16975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
GAF
AAA_2
HTH_8
PAS_4
AAA_5
HTH_30
HTH_23
AAA_16
HVO_A0261_N
Mg_chelatase
HTH_50
HTH_7
HTH_22
Motif
Other DBs
NCBI-ProteinID:
QXH65316
UniProt:
A0ABX8NUS6
LinkDB
All DBs
Position
3780424..3782286
Genome browser
AA seq
620 aa
AA seq
DB search
MLAVNSREHVDCVSRVVRNAERLPQAPVPSLIFDSWRRSMEQHHLDPGSLQGPRILTEPL
LKECRERAELFMRIASEAVGQLHHRVRQADYCVMLTDAQGQTIDHRVDTAIRSDCRKAGL
YLGTCWSEAEEGTCGVATVLTSKAAVTVHKRDHFRAAFIGLTCSAAPIFDPQGNLLGVMD
ASALKSPDDRRSQHLVRQMVAQSAQAIENAFFMHSARQHWVLQAHSTPGYVDSQPDLLLA
WDQDGHLQALNSKARQALRLRFGQVPEHIGEVFDLDALRAVTDQSTRQLCWRGQSQALHV
RVNTPRRAQARALPNTEVDPRVDEHLRLAVRVKDRNLPVLVQGETGAGKEVFARQLHERS
ARRDGPFVAVNCAAIPENLIESELFGYVAGAFTGASSKGMPGLLVQADGGTLFLDEIGDM
PLALQTRLLRVMAEGEVAPLGGAKTRTVDIQVICASHRDLAALVNEGRFREDLYFRLGCA
RFCLPPLRERTDKLALINRLLEQEARTSGVSPGISQAALERLLGYAWPGNVRQLRHVLAY
ACAVCEGGTLQLSDLPMEVRGELVEAPAEPSVSPERQVVLDALIRHRWKPLPTAQALGIS
RATLYRRVNQLGIDMPGKTT
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccgtgaactccagagagcacgtcgactgcgtcagtcgcgtggtccgcaatgcc
gaacgcctgccccaggcgccggtgccgtcgttgattttcgattcatggcgccgctccatg
gaacaacaccatctggaccctggctcgctgcaagggccgcgcatcctcaccgaacccctg
ctcaaggaatgccgcgaacgcgccgagctgttcatgcgcattgcaagcgaagccgtcggc
caattgcaccaccgcgtgcgccaggccgattactgcgtgatgctcaccgacgcccagggc
cagaccatcgaccaccgcgtggacacggcgattcgcagcgactgccgcaaggccggcctg
tacctgggcacctgctggtcggaagccgaagaaggcacctgcggcgtagccaccgtgctc
accagcaaagccgccgtgaccgtgcacaagcgcgaccactttcgcgcggcgttcatcggc
ctcacctgctccgccgcgccgatcttcgacccgcagggcaacctgttgggcgtgatggac
gcctcggcgctcaaatccccggatgaccggcgcagccagcacctggtgcggcaaatggtg
gcgcagagtgcccaggccatcgagaacgccttcttcatgcacagcgctcgccagcactgg
gtactgcaggcgcacagcacgccgggctatgtggacagccagcccgacctgttgctggcg
tgggaccaggacggacacctgcaggccttgaacagcaaggcgcgccaggccctgcgcctg
cgctttgggcaagtgccggagcatatcggcgaggtgttcgacctggacgcgttgcgcgcg
gtcaccgaccagtcgacccggcaactgtgctggcgggggcaatcgcaagccctgcacgta
cgggtcaacacgccacggcgcgcacaagcacgagcactgccgaacacggaggtcgacccg
cgtgtggatgagcatctgcgcctggccgtgcgggtcaaggaccgtaacctgccggtgctg
gtgcagggggaaaccggcgcgggcaaggaagtcttcgcccgccaactgcatgagcgcagc
gcccggcgggacggcccttttgtggcggtgaactgcgcggcgattcccgaaaacctgatc
gaaagcgagctgttcggctacgtggccggggcctttaccggcgcgtccagcaaaggcatg
ccgggcctgttggtgcaggccgatggcggcacattgttcctggatgaaatcggtgacatg
cccctggccttgcaaacgcgcttgctgcgggtgatggccgagggtgaagtggcgccgctg
ggcggggccaagacccgtaccgtggatatccaggtgatctgcgccagccaccgcgacctg
gcggcgctggtcaacgaggggcgctttcgcgaagacctgtactttcgcctcggctgcgcg
aggttctgcctgccgcccttgcgcgagcgcaccgacaaactggcgttgatcaaccggctg
ctggagcaggaggcgcgtaccagcggcgtgtcgccgggcatcagccaggccgcgctggaa
cgactgctgggttatgcctggccgggcaatgtgcggcaactgcgccatgtgttggcgtat
gcctgcgcggtgtgtgagggcggtacactgcaactgtcagacttgccgatggaggtgcgg
ggcgagttggtcgaggcgccggcagaaccgagcgtcagcccggaacgccaggtggtgctg
gatgcgttgattcggcatcgttggaagccgttgccgacggcacaggcgttggggatttca
cgtgcaacgctttacagacgggtgaaccaactgggcatcgacatgcctggcaagaccacc
tga
DBGET
integrated database retrieval system
