Pseudomonas asgharzadehiana: KSS96_17430
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Entry
KSS96_17430 CDS
T07697
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pasg
Pseudomonas asgharzadehiana
Brite
KEGG Orthology (KO) [BR:
pasg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pasg03000
]
KSS96_17430
Transcription factors [BR:
pasg03000
]
Prokaryotic type
Helix-turn-helix
Other families
KSS96_17430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_30
AAA_5
nSTAND6
HTH_7
AAA_2
HTH_23
AAA_3
HTH_28
AAA
HTH_22
AAA_7
AAA_16
dnstrm_HI1420
HTH_20
PAS
DUF2089
Mg_chelatase
HTH_10
nSTAND3
HTH_Tnp_1
HTH_11
HTH_38
HTH_17
MCM
HTH_psq
AAA_14
Motif
Other DBs
NCBI-ProteinID:
QXH65404
UniProt:
A0ABX8NVC4
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All DBs
Position
3866831..3868642
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AA seq
603 aa
AA seq
DB search
MAEPLPHDIIIQDSWRRCRAFGLDHQSTPSFDQLPAEGISQLLESQHSLVQTTHQEVLPY
YENILSNSNCLIMLADNQGQVLTSWGTQRFIEPKLARGFSAGASWKERCSGTNAIGTALA
CAQAVHIEHDEHFLKANRFMTGSAAPIFDAQREIIAVLDVSSDSYLPPSHTLGMVKMMSQ
TVENRLILNLFRDEHFQLTFNTGLSNLDSQWAGLLIFDESGQVLSANRRADNLLGISLSR
VMIDSLFKVSLLELLNQPEGLPFSLQAAGRNRFQCVLKRPQQMPVQARVFSEPAAPKPAA
IGLKTLHFGDVRVEKAVRQAERLLEKDIPLLIHGETGVGKEVFVKALHQASSRSRQAFIA
VNCAAIPAELVESELFGYEKGAFTGANQKGSIGLIRKADKGTLFLDEIGDMPLPTQARLL
RVLQERCVQPVGSSELFAVDLRIISATNRALREWVQAGRFREDLYYRIGGLTLELPPLRE
RSDKQALFQQLWQQHREPTQWAGLSSEVLALFEQHPWPGNLRQVSSVLQVALAMAEEQPI
RPEHLPDDFFVDLNVAPPPTASEYLDDSIDLNERLKAAGGNISHLARELGVSRNTLYKRL
RQG
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccgctgccccacgacatcatcattcaggactcctggcgccgttgccgcgcg
tttggcctggaccaccagagcacgcccagcttcgaccagttgccggccgagggcatcagc
caattgctggaaagccagcactccctggtgcagaccacccaccaggaggtgctgccctac
tacgagaacatcctcagtaattccaattgcctgatcatgctggccgacaatcagggccag
gtgctgacgtcgtggggcactcaacgctttatcgagcctaaactggcccgtggcttcagc
gccggcgccagctggaaggagcgctgcagcggcaccaacgcgatcggcaccgcactggcc
tgcgcccaggcagtgcatatcgaacacgacgaacacttcctcaaggccaaccgcttcatg
accggctcggcggcgccgatcttcgatgcgcaacgtgaaatcattgcggtgctggatgtg
tccagcgacagctacctgccgccctcccacaccctgggcatggtcaagatgatgagccag
accgtggaaaaccggctgatcctcaacctgtttcgcgacgagcattttcaactgaccttc
aacaccggcttgagcaacctcgacagccagtgggccggcctgttgatcttcgatgaaagc
ggccaggtgctgtcggccaaccggcgcgccgacaacctgctgggcatcagtctgtcgcgg
gtgatgatcgacagtttattcaaggtgtcattgctggagttgctcaaccagccggaaggc
ttgccgttttcgttgcaggcggcgggacgcaatcggttccagtgcgtgttgaaacgcccc
cagcaaatgccggtgcaggcgcgggtattcagcgagcctgctgcgccaaaaccagcggcg
attggcctcaagaccctgcatttcggcgatgttcgcgtggaaaaagccgtgcgtcaggcc
gagcgcctgctggaaaaagacatcccgctgctgatccacggcgaaaccggcgtgggcaaa
gaggtgttcgtcaaagccctgcaccaagccagttcccgcagccggcaggcctttatcgcg
gtgaactgtgcggcgattcccgcagaactggtggaatcggaactgttcggctatgaaaaa
ggtgcgttcaccggtgccaaccaaaaaggcagcatcggcctgatccgcaaggccgacaag
ggcacattgtttctcgacgagatcggcgatatgccgctgccgacccaggcccgcttgctg
cgcgtattgcaggagcgttgcgtgcaaccggtggggagcagcgagttgtttgcggtggac
ctgcgcattatttcggccaccaaccgcgccctgcgcgaatgggtgcaggccgggcgcttc
cgtgaagacttgtactaccgcatcggcggcctgacgctggagttgccgcccttgcgcgag
cgcagcgacaagcaggcgctgtttcagcaactgtggcagcaacaccgcgaaccgacccaa
tgggccggcctgagcagcgaggtgctggcgctttttgaacagcatccatggccggggaat
ttgcgccaggtcagcagcgtgctgcaggtggcgctggcaatggccgaggaacaaccgatc
cgcccggagcatctgccggatgatttttttgtggacttgaatgtggccccgccgccaact
gccagtgaatacctggatgacagcatcgacctgaacgagcgcctgaaggcggcgggcggg
aatatctcccacctggcgcgcgagttgggggtgagtcgcaacaccttgtacaagcggttg
cgccaaggttag
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