Pseudomonas asgharzadehiana: KSS96_20655
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Entry
KSS96_20655 CDS
T07697
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pasg
Pseudomonas asgharzadehiana
Pathway
pasg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pasg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KSS96_20655 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pasg03019
]
KSS96_20655 (recQ)
03400 DNA repair and recombination proteins [BR:
pasg03400
]
KSS96_20655 (recQ)
Enzymes [BR:
pasg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KSS96_20655 (recQ)
Messenger RNA biogenesis [BR:
pasg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KSS96_20655 (recQ)
DNA repair and recombination proteins [BR:
pasg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KSS96_20655 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
HTH_40
ResIII
GerE
HTH_23
HTH_29
Motif
Other DBs
NCBI-ProteinID:
QXH66005
LinkDB
All DBs
Position
complement(4577720..4579846)
Genome browser
AA seq
708 aa
AA seq
DB search
MLEQAQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLA
VVVSPLIALMDDQVATLEELGVAAASLNSTLSAEQQRDLAARIKRGEVKMLYLAPERLVQ
PRMLAFLQSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRT
REEIVERLHLQNAERFLSSFDRPNIFYRIVPKEQPRKQLLAFLSERRSDAGIVYCLSRKK
VDEVAAFLCEQGYPALPYHAGLPNETRSAHQKRFLNEEGLIMVATIAFGMGIDKSNVRFV
AHMDLPKSLEAYYQETGRAGRDGLPADAWMVYGLQDVVMLKQMLQNSEGDERHKRLEQHK
LDAMLSLCEETRCRRQTLLAYFDEDMPQPCGHCDNCMDGVQTWDATEPARQALSTIYRTG
QRYGVGHLVDVLLGKDNEKVRSFGHEKLSVYGVGKARAEGEWRSLFRQMVARGLVDIDIE
GYGGLRLNDSCRPLLKGEVSLELRRDLKPQTTAKSSTSQASQLVRLEEREQWEALRTLRR
KLAQEHSVPPYVIFPDSTLLEMLREQPTTMAQMGRVSGVGARKLERYGQAFLEVLGGQAE
APKEIADIRHELISLARAGMTPIQIAGQLQCSEKNVYTLLAEAIGKQQLSLEQALDLPED
LLGEIQDAFLDGEGELPPVAEIAPLFSGRVPDGVLYCVRAALQSEFEI
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgctcgagcaggctcaacgcgtcctcaaggacatcttcggctacgacagttttcgtggc
cgccagggtgcgatcattgagcgcgtggccagtggtggagacgccctggtattgatgcct
accggcggcggcaaatccttgtgcttccaggtgccggccttgctgcgcaatgggttggcc
gtggtggtgtcgccgttgatcgcgttgatggacgatcaggtcgctaccctggaagaactc
ggcgtcgcggctgcgtccttgaactccaccctcagcgccgagcagcagcgcgatctggct
gcgcgcatcaagcgtggcgaagtgaaaatgctgtacctggcccctgagcgcctggtgcag
ccgcgcatgctggcctttttgcaaagcctggaaatcgccttgttcgccatcgatgaagcg
cactgcgtctcgcagtggggccacgatttccgtcgcgaatacctgcaactgggtcagttg
gccgaactgttccccgatgtgccgcgtatcgccctgaccgccactgccgacaagcgcacc
cgcgaagaaatcgtcgagcgcctgcacctgcagaatgccgagcgtttcctgtcgagcttc
gaccgtccgaatatcttctaccgcattgtgcccaaggagcagccgcgcaagcagttgctg
gcgttcctctccgaacggcgcagcgatgcgggcatcgtttattgcctgtcgcgcaagaag
gtcgacgaagtggccgcgttcctctgcgagcagggctacccggcactgccgtaccacgca
gggttgccgaatgaaacgcgctctgcgcaccagaagcgcttccttaacgaggaaggcctg
atcatggtggccaccatcgcgttcggcatgggtatcgacaaatccaacgtacgtttcgtg
gctcatatggaccttcccaagtcccttgaggcgtactaccaggaaaccggtcgtgccggc
cgtgatggcctgccggcggatgcctggatggtctacggcctgcaagacgtggtgatgctc
aagcagatgttgcagaactccgaaggcgacgaacgccacaagcgactggagcagcacaag
ctcgacgccatgctctccctgtgtgaagagacccgctgccggcgccagaccttgctggcg
tacttcgacgaagacatgccacagccgtgtggccactgcgataactgcatggacggcgtg
cagacctgggacgccactgagcctgcgcgtcaggccttgtccacgatctatcgcaccggc
cagcgttatggcgtggggcatctggtggatgtactgctgggcaaggacaacgaaaaggtg
cgcagcttcggtcacgaaaagctgtcggtctatggggtcggcaaggcccgcgccgaaggt
gagtggcgttcgctgttccggcagatggtcgcgcgcggcctggtggacatcgacattgag
ggctatggcggcctgcgcctgaacgacagttgccggccgctgctcaagggcgaggtgagc
ctggagctgcgccgcgacctcaagccgcagaccacggccaagagcagcaccagccaggcc
agccagttggtgcgcttggaggaacgcgaacagtgggaagccctgcgtacccttcgacgc
aaactggcgcaggaacacagcgtgccgccttacgttattttccccgactccaccttgctg
gagatgctgcgcgagcagccgaccacgatggcgcaaatggggcgggtcagtggtgtgggg
gcgcgcaagcttgagcgctacggccaggcgttcctcgaagtgctcggcggccaggccgaa
gcgccgaaggaaatcgcggatattcgccacgagctgatcagcctggcacgtgccggcatg
acgccgatccagatcgccggccagttgcaatgctcggaaaagaacgtctacaccttgctg
gccgaagccatcggcaaacaacagctgtcgctggagcaggcgcttgatttgccggaagat
ttgctcggcgagatccaggacgcgtttcttgatggcgagggcgaactgccaccggtggcc
gagatcgcgccgctgttttcagggcgcgttccagacggtgtgttgtactgcgtgcgggcc
gctttgcagtctgaattcgaaatttag
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