Pseudomonas asgharzadehiana: KSS96_23240
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Entry
KSS96_23240 CDS
T07697
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pasg
Pseudomonas asgharzadehiana
Pathway
pasg03410
Base excision repair
pasg03430
Mismatch repair
pasg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pasg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KSS96_23240 (recJ)
03430 Mismatch repair
KSS96_23240 (recJ)
03440 Homologous recombination
KSS96_23240 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pasg03400
]
KSS96_23240 (recJ)
DNA repair and recombination proteins [BR:
pasg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KSS96_23240 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KSS96_23240 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KSS96_23240 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QXH66486
UniProt:
A0ABX8NXY3
LinkDB
All DBs
Position
complement(5116314..5118023)
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AA seq
569 aa
AA seq
DB search
MRIDPRPLPAVLPFLGELPPLLTRLYAARGVQSEAELDKSLARLIPYQQLKGIDAAVDLL
VTALEQRQRILIVGDFDADGATASTVGTLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVAV
ALQREPQLLITVDNGISSVEGVAAAKAAGLRVLVTDHHLPGDELPAADAIVNPNQPGCAF
PSKALAGVGVIFYVLMALRARLRDLGWYTNTPQPNIGDLLDLVALGSVADVVPLDANNRI
LVHQGLERIRAGRARPGIKAILEVAKRDAARITSTDLGFILGPRLNAAGRLDDMSLGIEC
LLTTDFAAAREMAAQLDGMNQDRKSIEQGMQREALAQLKDLPMESMPYGLCLFDPEWHQG
VIGILASRMKERYFRPTIAFADAGDGLLKGSGRSVQGFHIRDALAVVASQHPSLITKYGG
HAMAAGLTLPEANFPLFAEAFDAEVRRQLREEDLTGRLLSDGTLAVEEFHLELARALRHA
GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKSECGSVKLDGIAFGVDREVWPNPTVR
WVELAYKLDVNEFRGNETVQLMIAHIEPR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgatcctcgcccgttgcccgctgtcctgccgtttctcggtgaattgccgccg
ctgttgacccgtctttacgccgcccgcggggtgcaatcggaggctgagctggataaaagc
ctggcacggttgattccctatcagcagctcaagggcatcgacgcggcggtagacctgctg
gtgacggccctggaacaacgtcagcgcatcctgatcgtcggcgacttcgatgccgatggc
gccaccgccagtaccgtgggcaccttgggcctgcgtttgctgggtgcggcccatgtcgat
tacctggtacccaaccgcttcgaatatggctatggcctgaccccggaaattgtcgccgtg
gccctgcagcgcgagccgcaattgctgatcaccgtggataacggcatctccagtgtggaa
ggggtggccgcggccaaggcggcggggctgcgggtgctggtgaccgaccaccacttgccc
ggtgacgagttgccggcagcggatgcgatcgtcaatccgaatcaacccggctgcgcgttc
cccagcaaggccctggccggcgtgggcgtgatcttctacgtattgatggccctgcgcgcg
cgcctgcgtgacctgggctggtacacgaacacgccgcagccgaacatcggcgatctgctc
gacctggtcgccctgggcagcgtcgccgacgtggtgcccctggacgccaacaatcgcatt
ctggtgcatcagggcctggaacgtatccgcgcgggtcgtgcgcggccgggaatcaaggca
atcctggaagtggccaagcgcgacgccgcgcgcatcacttcaaccgacctgggctttatc
ctcgggccacggctcaacgccgccgggcgtctggacgatatgagtctgggcatcgaatgc
ctgctcaccaccgattttgcggccgcacgggaaatggccgcgcaattggatggcatgaac
caggaccgcaaatccatcgaacaaggcatgcagcgcgaggccctggcccagctcaaggac
ttgccgatggaatcgatgccctatggcctgtgcctgttcgaccccgagtggcatcagggc
gtgatcggtattctggcgtcgcgcatgaaagagcgctatttccgcccgaccatcgccttc
gccgacgccggtgatggcctgctcaagggctcggggcgctctgtgcagggctttcacatc
cgtgatgccctggcggtcgtcgccagccagcatcccagcctgatcaccaagtacggcggc
cacgccatggcggccgggctgacgttgcccgaggcaaatttcccactgtttgccgaggcc
tttgacgccgaggtgcgtcgtcaactgcgtgaagaagacctcaccggtcgcctgctgtcc
gatggcaccctggcggtggaagagtttcatctggaactggcccgtgcgctacggcatgca
ggcccgtgggggcagcactttcccgagccgttgtttcacggtgtgttccagttggttgag
cagcgcgttgtgggggagcggcacctgaaagtggtgctcaagagcgaatgcggctcggtg
aagctcgatggcattgcgtttggggtggatcgggaggtctggccgaaccctaccgtgcgt
tgggtggaattggcctacaagctggacgtgaacgagtttcgtgggaatgagacggttcaa
ctgatgatcgcgcacatcgagccgcgctga
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