Pseudomonas asgharzadehiana: KSS96_24125
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Entry
KSS96_24125 CDS
T07697
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pasg
Pseudomonas asgharzadehiana
Pathway
pasg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pasg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KSS96_24125 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pasg03400
]
KSS96_24125 (recD)
Enzymes [BR:
pasg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KSS96_24125 (recD)
DNA repair and recombination proteins [BR:
pasg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KSS96_24125 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
SH3_13
NAT10_TcmA_helicase
Viral_helicase1
AAA_22
UvrD-helicase
AAA_17
SLFN-g3_helicase
AAA_16
AAA_28
T2SSE
NACHT
NTPase_1
AAA_25
AAA_5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QXH66651
UniProt:
A0ABX8NYF8
LinkDB
All DBs
Position
complement(5310499..5312568)
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AA seq
689 aa
AA seq
DB search
MSLSPLPLEALEPLGRAADLVQLLERWVDRGWLRALDKAFVGFLHELDPQADPLVLLAAA
LTSHQLGHGHVCLDLFETLKAPDFALSLPPEGDLQTGAMLLPSQLLDGLDGAHWCHALAA
SPLVALALDASEAAQSRPLVLSGKRLYLRRYWAYERRIDSALRQRLASEEAVAADLPERL
NGLFDQPAPDGVIDWQKLACALATRGAFSIVTGGPGTGKTTTVVRLLALLQAPAVEAGSP
LRIRLAAPTGKAAARLTESISQQVLSLKVPQSVKEKIPTQVTTVHRLLGSRPGTRHFRHH
LGNPLPLDVLVVDEASMIDLEMMANLLDALPPHARLVLLGDKDQLASVEAGAVLGDLCRD
AEAGWYNPQTRQWLQTVSGEDLSAGGLREDLDGSHPLAQQVVMLRYSRRFGEGSGIGQLA
RWVNQQNAEEARKLLAARSHRDLFCVGLKGEHDHALEHLVLDGQGEGAEGYRYYLNLLHS
ARPSLDTPREDAAWTHWAQQLLQAFDAFQLLCAVRKGPWGVEGLNLRITAALRKVRLIEG
EEQWYEGRPVLMTRNDYGLGLMNGDIGIALKLPESNGGPHVLRVAFPRNDGQGGVRFVLP
SRLNDVETVYAMTVHKSQGSEFTHTALILPDALNPVLTKELIYTGITRAKRWFSLIEPRG
GVFEEAVRRKVKRLSGLMLELGQEADKTD
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgtcgccgttaccgcttgaagcgctggagcccctgggccgcgccgccgacctg
gtgcagttgcttgagcgatgggttgaccgtggttggctgcgggcgttggacaaggccttt
gtcggtttcctgcatgaactcgacccgcaggccgaccccttggtgctgctggcggcggcc
ttgaccagccatcaattgggccacggtcacgtgtgcctcgacctgtttgaaaccctcaag
gcgccggatttcgccttgtccttgccgcccgaaggcgacctgcaaaccggtgccatgcta
ctgccgtcgcaattgcttgatggtctcgacggtgcccattggtgccatgccctggccgcg
agcccgctggtcgccctggcgttggacgccagcgaagccgcgcaaagccgtccgctggtg
ctgtccggcaaacgcttgtacctgcgccgctactgggcctacgagcgccgcatcgacagc
gctctacgccagcggctggcgagcgaagaagcggtcgccgccgatttgcccgaacgcctc
aacggtctgtttgaccagccggcgcccgatggcgtgatcgactggcaaaagctcgcctgc
gccctggctacccgaggtgccttcagcatcgtcaccggcggccccggtaccggcaagacc
accaccgtggtgcgcttgctcgccttgttgcaggcgcctgccgtcgaggccggcagcccg
ttgcgcatccgtcttgccgcgcccaccggtaaagccgccgcgcgccttaccgagtccatc
agccagcaagtgctgtcgctgaaagtgccgcaaagcgtgaaggaaaagatcccgacccaa
gtcaccactgttcaccgtttactgggcagtcgccccggcacccggcacttccgtcatcac
ctgggcaacccattgccattggatgtgctggtggtggacgaagcctcgatgatcgacctg
gagatgatggccaacctgttggacgcgttgccgccccatgcgcgcctggtgctgttgggc
gacaaggaccaactcgcctcggtggaggccggcgccgtactcggcgacttgtgccgcgac
gccgaagccggctggtacaacccccagacccgccaatggctgcaaaccgtcagcggcgaa
gacctcagcgccggcggcctgcgcgaagacctcgacggtagccatcccctggcccagcaa
gtggtgatgctgcgttactcgcgacgtttcggcgaaggcagcggcatcggccaactggca
cgctgggttaaccagcagaacgccgaagaggcgcgcaaactgctggccgcgcgcagccac
cgcgacctgttctgcgtaggccttaagggtgagcacgaccacgccttggaacatctggtt
ttggacgggcagggtgagggtgccgagggctatcgctattacctcaacctgctgcacagc
gcccgtccgtccctcgacaccccgcgtgaagacgccgcctggacccactgggcacagcaa
ttgttgcaagccttcgatgcgtttcagctgctctgcgcggtgcgcaagggcccgtggggc
gtggaagggctgaacctgcgcatcaccgcggccttgcgcaaagttcggctgatcgagggc
gaagagcaatggtatgaaggccgcccggtactcatgacccgtaatgactatggcctgggc
ctgatgaacggcgacatcggcatcgccctcaaactccccgaaagcaacggcggcccccac
gtgttgcgcgtggcgttcccacgtaacgacggccagggcggcgtgcgatttgtgctgccc
agccggcttaacgatgtggaaaccgtgtacgccatgaccgtgcacaaatcccagggctcg
gagttcactcacacggcattgatcctgccagacgccttgaacccggtattgaccaaggag
ctgatctacaccggcattacccgcgccaagcgctggttcagcctgatcgaaccgcgtggc
ggggtgtttgaggaggccgtacggcgcaaggtcaagcgcttgagtgggttgatgctggag
ctgggccaggaagcagacaaaactgactga
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