Pseudomonas asgharzadehiana: KSS96_24280
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Entry
KSS96_24280 CDS
T07697
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pasg
Pseudomonas asgharzadehiana
Pathway
pasg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pasg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KSS96_24280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pasg03019
]
KSS96_24280
Enzymes [BR:
pasg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
KSS96_24280
Messenger RNA biogenesis [BR:
pasg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KSS96_24280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QXH66676
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All DBs
Position
5350258..5351661
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AA seq
467 aa
AA seq
DB search
MLKKLFQSFRSPLRRTQHKRSTPEVLNSSQHSLQRAQFSRYAVNIVERLQNAGYQAYLVG
GCVRDMLLNITPKDFDVATSATPEQVRAEFRNARIIGRRFKLVHIHFGREIIEVATFRAG
HPQNDEEEDTNQSSRNESGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERILDYANGV
HDIRNNLIRLIGDPTQRYQEDPVRMLRAVRFAAKLNFGIEKHTAAPIRELAPMLREIPSA
RLFEEVLKLFLSGYAADTFEMLVDLQLFDPLFPASAEALEYNPTYTHTLISEALINTDLR
IKQNKPVTPAFLFAALLWPALPKRVLRLQDRGMPPIPAMQEAAHELIAEQCQRIAIPKRF
TMPIREIWDMQERLPRRSGKRADLLLDNPRFRAGYDFLLLRESAGEQTDGLGEWWTDYQD
ANDSERREMIRELGSKGEATGEGPKKRRRSGTKRKRSAADASGAAGE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagttgttccagtcattccgttctcccttgcgtcgtacgcaacacaaacgc
agcacgcctgaagtgctcaatagcagccaacattcgctgcaacgcgctcagttcagccgt
tatgcggtgaatatcgtcgaacgtttgcagaacgccggttaccaggcctatctggtcggc
ggttgcgtacgcgacatgctacttaatatcacgcccaaggatttcgacgtcgccaccagt
gccacacctgaacaggtgcgcgccgagtttcgcaatgcgcgcatcatcggccgccgcttt
aagctggtgcacatccatttcgggcgcgaaatcatcgaagtcgcaacgttccgcgccggc
catccgcaaaacgatgaagaggaagacaccaatcagtcctcccgcaacgagagcggtcgc
atcctgcgtgacaacgtttatggcaccctggaagaagacgcgcaacgccgcgacttcacc
atcaatgccctgtactacgacccggtcagcgaacgcatcctcgattacgccaacggcgta
cacgacatccgcaacaacctgatccgcctcatcggcgacccgacgcaacgctaccaggaa
gacccggtacgtatgctgcgggccgtgcgctttgccgccaagctcaacttcggcatcgag
aagcataccgctgcgccgattcgcgaactggcgcccatgctgcgggaaattccctcggca
cgcctgttcgaagaagtgctcaagctgttcctctcgggctacgccgccgacacgttcgag
atgctcgtcgacctgcagttgttcgaccctctgttcccggccagcgccgaagcattggaa
tacaacccaacctatacccacacgctgatcagcgaagcgctgatcaacaccgacctgcgc
atcaagcagaacaaaccggtcaccccggcgttcctgtttgccgccctgttgtggccagcc
ctgccaaaacgtgtactgcgtttgcaggaccgtggcatgccgccgattccggccatgcag
gaagccgctcacgaactgattgccgaacagtgccagcgcatcgccattccaaagcgcttc
accatgccgatccgagagatttgggacatgcaggagcgcctgccgcgccgcagcggaaaa
cgcgccgacctgctgttggacaacccacgcttccgcgccggctacgatttcctgctgctg
cgcgaaagcgccggcgaacagaccgacggcctgggcgaatggtggaccgattaccaggac
gccaatgacagcgagcgtcgcgagatgattcgtgagctgggcagcaaaggtgaagcaacc
ggcgaagggccgaagaagcgccggcgcagcggtaccaagcgcaagcgcagcgcagccgat
gcctcgggcgccgcaggcgaataa
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