Pseudomonas asgharzadehiana: KSS96_24330
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Entry
KSS96_24330 CDS
T07697
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pasg
Pseudomonas asgharzadehiana
Pathway
pasg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pasg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KSS96_24330 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pasg03019
]
KSS96_24330 (pnp)
03016 Transfer RNA biogenesis [BR:
pasg03016
]
KSS96_24330 (pnp)
Enzymes [BR:
pasg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KSS96_24330 (pnp)
Messenger RNA biogenesis [BR:
pasg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KSS96_24330 (pnp)
Transfer RNA biogenesis [BR:
pasg03016
]
Prokaryotic type
tRNA degradation factors
KSS96_24330 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
S1_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
QXH66686
UniProt:
A0ABM7TP55
LinkDB
All DBs
Position
complement(5364021..5366126)
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AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVTVLVTVVGAKTADPSKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQLKASSLDMVV
AGTSEAVLMVESEAKELTEDQMLGAVLFAHDEFQAVIKAVTELAAEAAKPTWTWAAAPEA
TELLGAIRSEFGAAISDAYTITVKADRYARLGELKDQVVAKLSGEEGQPSASDVKAAFGE
IEYRTVRENIVNGKPRIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVQAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAILT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQ
IIGQSRTELSENAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggttatcaaaaaattccagttcggtcagtcgaccgttaccctcgagacaggc
cgtatcgcccgtcaagcctccggcgcagtgctggttaccgttgacgatgacgtgaccgta
ttggtgaccgttgttggcgccaagaccgctgacccgagcaagggcttcttccctctgtcc
gttcactaccaggaaaagacttacgctgccggtaagatccctggcggtttcttcaagcgc
gaaggccgtccttccgagaaagaaaccctgacttcccgactgatcgaccgtccgatccgt
ccgctgttcccagaaggcttcatgaacgaagtgcaggttgtctgcaccgtcgtttccacc
agcaagaagactgatccggacatcgctgcgatgatcggtacttcggcggccctggccatc
tccggcattcctttcgatggcccgattggcgctgcccgcgttgcgttccacgaaagcact
ggttacctgctgaacccgacttacgagcaactgaaagcatcgagcctggacatggtcgtt
gccggtacctcggaagccgtcctgatggttgaatcggaagccaaagagctgaccgaagac
cagatgctgggcgccgtactgtttgcccatgacgagttccaagcggttatcaaggctgtc
accgagctggctgccgaagctgccaagccaacctggacctgggctgctgccccggaagcc
accgaactgctgggcgctatccgctccgagttcggcgctgccatctccgatgcctacacc
atcaccgtcaaggccgaccgttatgctcgcctgggcgagttgaaagaccaggttgtagcc
aaactgtccggtgaagaaggtcagccttcggccagcgacgttaaagctgcattcggtgaa
atcgaataccgcaccgttcgcgagaacatcgttaacggcaagccacgtatcgacggtcgc
gacacccgcaccgtacgtccgctgaacatcgaagtcggcgttctgccgaaaactcacggt
tcggcactgttcacccgtggcgaaactcaggctctggtagtcgcgaccctgggtactgcc
cgtgacgcacagctgctggacaccctggaaggcgagaaaaaagacccgttcatgctgcac
tacaacttccctccgttctcggtgggcgagtgtggtcgcatgggcggtgctggtcgtcgc
gaaatcggtcacggccgtttggcgcgtcgttcggtccaggccatgctgcctgccgctgac
gtgttcccgtacaccatccgtgttgtgtcggaaatcaccgagtccaacggttccagctcc
atggcttccgtttgcggtgcttccctggccctgatggatgccggtgtgccgatgaaggca
ccggttgccggtatcgccatgggcctggttaaagaaggcgagaagttcgccatcctgacc
gacatcctgggtgacgaagaccacctgggcgacatggacttcaaagtagccggtaccgct
aaaggtgttaccgcgctgcagatggacatcaagatcaagggcatcaccgaagaaatcatg
gagatcgccctgggccaagccctggaagcgcgcctgaacatcctcggtcagatgaaccag
atcattggtcagtcgcgtaccgagctgtcggaaaatgctccgaccatgatcgcgatgaaa
atcgacaccgacaaaatccgcgatgttatcggtaaaggcggcgcgaccattcgtgcgatc
tgtgaagagaccaaggcttcgatcgacatcgaagacgacggctcgatcaagatcttcggc
gaaaccaaggaagcggctgaagcagcacgtcagcgcgttctgggcatcaccgctgaagcc
gaaatcggcaagatctacgttggtaaggttgagcgcatcgtcgacttcggcgcattcgtc
aacatcctgcctggcaaagacggtctggttcacatctccatgctgagcgacgctcgcgtt
gaaaaagtgaccgatattctgaaagaaggccaggaagtggaagtgctggtactggacgtg
gacaaccgcggtcgtatcaagctgtccatcaaggacgtagcagcagccaaggcttcgggc
gtttaa
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