Pseudomonas asgharzadehiana: KSS96_24340
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Entry
KSS96_24340 CDS
T07697
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pasg
Pseudomonas asgharzadehiana
Brite
KEGG Orthology (KO) [BR:
pasg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pasg03016
]
KSS96_24340 (truB)
Enzymes [BR:
pasg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KSS96_24340 (truB)
Transfer RNA biogenesis [BR:
pasg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KSS96_24340 (truB)
Prokaryotic type
KSS96_24340 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
QXH66688
UniProt:
A0ABX8NYK5
LinkDB
All DBs
Position
complement(5366708..5367625)
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPIGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLMQLGKTTTTADAEGDVLQVRDVTVGRADIEAALPAFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLACEGDTARLAVDCSKGTYI
RTLVEDIGEQLGCGAYVAELRRTQAGPFTLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLHFSEHSAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgtcgcaacgtcagcggcattattctgctcgacaagccc
attggctttacctccaatgccgctttgcagaaggttcgctggctgctcaatgccgagaag
gccgggcacaccggcagcctcgaccccctggccaccggtgtgttgccgttgtgctttggc
gaagctaccaagttctcgcaatacctgctcgattccgacaagggttacgaaaccctgatg
caactgggcaagaccaccaccacggccgatgctgaaggtgacgtcttgcaggttcgcgac
gtgaccgttggtcgcgctgatatcgaagcggctttacccgcttttcgtgggcaaatcagc
cagataccgccgatgtactcggctctcaagcgcgacgggcagcctctttacaagctggca
cgtgcaggcgaagtggtggagcgtgaaccgcgttctgttactattgcccggctggaattg
ctcgcctgtgagggtgacactgcccgattggcggtggactgcagcaaaggcacctatatc
cgtaccctggtagaggatattggtgagcaactgggctgcggcgcatacgttgccgaactg
cgacgtacacaagccggtcctttcaccttggcccagacggtcacgctggaagagttggaa
gcggtacacgccgaaggcggcaacgaagcggttgatcgcttcctgatgccttcggacagc
ggtttgctcgattggccattgctgcacttctcggagcacagcgcgttctactggctcaac
ggccagccggtacgcgccccggatgccccgaagttcggcatggtgcgagtacaggatcac
aacggtcgctttatcggtatcggtgaagtgagcgaagacgggcgtatcgcgccgcgtcga
ctgattcggtcagaatga
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