Pseudomonas asgharzadehiana: KSS96_24645
Help
Entry
KSS96_24645 CDS
T07697
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pasg
Pseudomonas asgharzadehiana
Pathway
pasg00260
Glycine, serine and threonine metabolism
pasg00460
Cyanoamino acid metabolism
pasg00630
Glyoxylate and dicarboxylate metabolism
pasg00670
One carbon pool by folate
pasg00680
Methane metabolism
pasg01100
Metabolic pathways
pasg01110
Biosynthesis of secondary metabolites
pasg01120
Microbial metabolism in diverse environments
pasg01200
Carbon metabolism
pasg01230
Biosynthesis of amino acids
pasg01240
Biosynthesis of cofactors
pasg04981
Folate transport and metabolism
Module
pasg_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pasg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KSS96_24645
09102 Energy metabolism
00680 Methane metabolism
KSS96_24645
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KSS96_24645
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
KSS96_24645
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
KSS96_24645
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
KSS96_24645
Enzymes [BR:
pasg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
KSS96_24645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
QXH66745
LinkDB
All DBs
Position
5441644..5442897
Genome browser
AA seq
417 aa
AA seq
DB search
MFSRDLTIAKYDADLFAAMEQEAVRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANSAVYLALLQGGDTILGMS
LAHGGHLTHGASVSSSGKLYNAVQYGIDANGLIDYDEVERLAVEHKPKMIVAGFSAYSQI
LDFPRFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARANAEIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKTYQQQVVKNAKAMAGV
FIERGFDVVSGGTENHLFLLSLIKQDISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECKELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgaccattgccaagtacgacgccgatctcttcgccgccatggag
caagaagccgtgcgccaggaagagcacatcgagctgatcgcttcggaaaactacaccagc
cctgcggtcatggaggctcaaggttcggttctgaccaacaagtacgccgaaggctaccca
ggcaagcgctactacggcggttgcgagtacgtcgacgtggttgagcagttggccatcgac
cgtgcaaaagagctgttcggcgccgattatgccaacgtccagccgcacgccggctcccaa
gccaacagcgcggtgtacctggccctgctgcaaggcggcgacaccatcctgggcatgagc
ctggcccacggcggtcacctgacccacggcgccagcgtttcatcctccggcaagctgtac
aacgccgttcaatacggtatcgatgccaacggcctgatcgactacgacgaagtcgagcgc
ctggcggtcgagcacaagccaaaaatgatcgtggccggtttctcggcctactcgcagatc
ctggatttcccgcgctttcgcgcaatcgccgacaaagtcggcgcctacctgttcgtcgac
atggcccacgtggccggtctggtcgccgctggcgtctacccgaacccggtgcctttcgct
gacgtggtcaccaccaccacgcacaagaccctgcgcggtccacgtggcggcctgatcctg
gcgcgcgccaacgccgagatcgagaagaagctgaactccgccgtattccctggcgcccag
ggtggcccgctggagcacgtgatcgccgctaaagcgatctgcttcaaggaagccctgcag
cctgagttcaagacctaccagcaacaagtggtgaagaacgccaaggccatggccggcgtg
tttatcgagcgcggctttgatgtcgtgtccggcggtaccgagaaccacctgttcctgctg
tcgctgatcaagcaggacatttccggtaaagatgcggacgctgccctgggcaaagccttc
atcaccgtgaacaagaactccgtgccaaacgacccacgctcgccgttcgtcacctcgggc
ctgcgcttcggcaccccggccgtgaccactcgtggcttcaaggaagcagagtgcaaggaa
ctggccggctggatctgcgacatcctggcagacctgaacaacgaagccgtgatcgacgcg
gtccgtgagaaggtcaaggccatttgcaaaaagctgccggtgtacggcgcttga
DBGET
integrated database retrieval system