Pseudomonas asgharzadehiana: KSS96_24850
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Entry
KSS96_24850 CDS
T07697
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pasg
Pseudomonas asgharzadehiana
Pathway
pasg03030
DNA replication
pasg03430
Mismatch repair
pasg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pasg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KSS96_24850
03430 Mismatch repair
KSS96_24850
03440 Homologous recombination
KSS96_24850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pasg03032
]
KSS96_24850
03400 DNA repair and recombination proteins [BR:
pasg03400
]
KSS96_24850
Enzymes [BR:
pasg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KSS96_24850
DNA replication proteins [BR:
pasg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KSS96_24850
DNA repair and recombination proteins [BR:
pasg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KSS96_24850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QXH66785
UniProt:
A0ABX8NYT1
LinkDB
All DBs
Position
complement(5483848..5484459)
Genome browser
AA seq
203 aa
AA seq
DB search
MERIAVIDFETTGITPSSHCRATEIGVVILERGQIVDRYQSLMNAGVRVPGFIEQLTGIS
NAMLRSAPSAERVMNEVNEFVGTTPLMAHNAAFDQKFWDFELGLIRRTRLQKFACSLLLA
RRLMPAAPNHKLGTLNTYAKLPHTGQAHRALADAEMAANLTAHLARELRQTHGLRELSHD
LLCTLQKVPAAKINEHLKKHRGF
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
ttggaacgtatagcggtcatcgactttgaaaccaccggcatcaccccgagcagccactgc
cgggccacggaaattggcgtggtcatccttgagcgcgggcaaatcgttgatcgctaccag
agcctcatgaatgccggcgtacgcgtgccgggctttatcgaacaactcaccggcatcagc
aacgccatgctgcgcagcgcgccgtcggccgagcgggtgatgaacgaggtcaacgaattc
gtcggcaccacgccgctgatggcgcataacgccgcgttcgaccagaagttctgggacttt
gagctgggcctgatccgccgcacccgcctgcaaaaattcgcctgctcgctgctgctggcc
cggcgcctcatgccggcggcaccgaaccacaaactcggcactctcaacacctacgccaaa
ctgccccacaccggccaggctcaccgggcgctggcggatgcggaaatggccgccaacctc
accgcgcacctggcccgggaactgcgccagacccacggcctgcgcgagctgtcccacgat
ttgctatgcaccttgcagaaagtgccggcggcgaagatcaatgagcatttgaagaaacat
cgcgggttctaa
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