Pseudomonas asgharzadehiana: KSS96_26425
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Entry
KSS96_26425 CDS
T07697
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pasg
Pseudomonas asgharzadehiana
Pathway
pasg00260
Glycine, serine and threonine metabolism
pasg00460
Cyanoamino acid metabolism
pasg00630
Glyoxylate and dicarboxylate metabolism
pasg00670
One carbon pool by folate
pasg00680
Methane metabolism
pasg01100
Metabolic pathways
pasg01110
Biosynthesis of secondary metabolites
pasg01120
Microbial metabolism in diverse environments
pasg01200
Carbon metabolism
pasg01230
Biosynthesis of amino acids
pasg01240
Biosynthesis of cofactors
pasg04981
Folate transport and metabolism
Module
pasg_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pasg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KSS96_26425
09102 Energy metabolism
00680 Methane metabolism
KSS96_26425
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KSS96_26425
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
KSS96_26425
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
KSS96_26425
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
KSS96_26425
Enzymes [BR:
pasg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
KSS96_26425
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Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QXH67078
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Position
complement(5806239..5807492)
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AA seq
417 aa
AA seq
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MFSKKDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMEAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALINAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGINTDTGLIDYDEVERLAVECQPKMIVAGFSAYSK
TLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKANEAIEKKLNAAVFPGAQGGPLMHVIAGKAVCFKEALEPGFKAYQQQVIDNAQAMAS
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKEADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVPQCIELAGWICDILDNLGDADVEANVAKHVSALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagaaagaccagatccagggttatgacgatgcactgctggcggcgatgaac
gccgaggagcagcgtcaggaagatcatatcgagctgatcgcgtcagagaactacaccagc
aagcgtgtgatggaagcgcaaggcagcggcctcaccaacaaatacgccgaaggctacccg
ggcaagcgctactacggcggctgtgagcacgtggacaaggtcgaggccctggccatcgaa
cgcgccaagcagctgttcggcgccgattacgccaacgtgcagccgcactccggttcgtcc
gccaacagcgccgtgtacctggcgctgatcaatgccggcgacaccatcctgggcatgagc
ctggcccacggcggtcacctgacccacggcgccaaagtgtcgtcctcgggcaagctgtac
aacgcggtgcaatacggcatcaacaccgataccggcctgatcgactacgacgaagtcgag
cgcctggccgtcgagtgccagccgaaaatgatcgtggccggtttctccgcctactccaag
accctggacttcccacgctttcgcgccatcgccgacaaagtaggcgcgttgctgttcgtg
gacatggcccacgtcgccggcctggtcgccgccggcctgtacccgaacccgctgccgtac
gccgacgtggtcaccaccaccacccacaagaccctgcgcggtccacggggcggcctgatt
ttggccaaggccaacgaagcgattgaaaagaaactcaacgccgccgtattccccggcgcc
cagggcggcccgctgatgcacgtcatcgccggcaaggccgtgtgcttcaaggaagcgctg
gagccaggcttcaaggcctaccagcaacaagtgatcgacaatgcccaggccatggcgagc
gtgtttatcaaacgcggctacgatgtagtgtccggcggcaccgataaccacctgttcctg
gtcagcctgatccgtcagggcttgaccggcaaagaggcggacgccgccctcggtcgcgct
cacatcaccgtcaacaagaacgcggtgccgaatgacccgcagtcgccgttcgtgacctcg
ggcctgcgtatcggtaccccggcggtgaccacgcgtggtttcaaagtgccgcagtgcatc
gaactggccggctggatctgcgacatcctcgacaacctcggcgacgccgatgtcgaggcc
aacgtggccaagcacgtgtctgccctgtgcgctgatttcccggtttatcgctga
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