Pseudomonas asgharzadehiana: KSS96_26590
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Entry
KSS96_26590 CDS
T07697
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
pasg
Pseudomonas asgharzadehiana
Brite
KEGG Orthology (KO) [BR:
pasg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pasg03009
]
KSS96_26590 (dbpA)
Enzymes [BR:
pasg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KSS96_26590 (dbpA)
Ribosome biogenesis [BR:
pasg03009
]
Prokaryotic type
rRNA helicases
KSS96_26590 (dbpA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
DIP2311-like_C
Motif
Other DBs
NCBI-ProteinID:
QXH67111
LinkDB
All DBs
Position
5846696..5848081
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AA seq
461 aa
AA seq
DB search
MTTIATAFNTLPLSAAMLANLDSLGYVEMTQIQAQSLPVILKGLDLIAQAKTGSGKTAAF
GIGLLNPINPRYFGCQALVMCPTRELADQVAKEIRRLARAEDNIKVLTLCGGVSLGPQIA
SLEHGAHVIVGTPGRIQQHLRKGSLVLDGLNTLILDEADRMLDMGFYDAIEDIISKTPPR
RQTLLFSATYPVSIKQLASKFMRAPQQVKAEAFHSDDQIEQRFYEISPQERMDAVSKVLA
HFRPASCVAFCFTKQQVQETVDHLTAKGISAVGLHGDLEQRDRDQVLAMFANRSTSVLVA
TDVAARGLDIDALDMVINVELARDSEIHIHRVGRTGRAGETGIAISLVAPSEAHRAQAIE
QLQKSPLNWDQLDNLKPQGGGPLLPQMSTLCIAAGRKDKVRPGDILGALTGEAGIPGAQV
GKIAIFDFQAFVAVERGIAKQALQRLNDGKIKGRSLRVRIL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtgactaccatcgccaccgcttttaatactttgcccttgtccgccgccatgctggctaac
ctcgactcgctgggttatgtcgagatgacgcagatccaggcgcaaagcttgccggtgatc
ctcaaagggctggacctgattgcccaggccaagaccggcagcggcaagaccgctgcattt
ggtatcggcctgttgaacccgatcaacccgcgttacttcggctgccaggcgctggtgatg
tgcccgacgcgtgagctggccgaccaggttgccaaggaaatccgccgcctggcccgcgcc
gaagacaacatcaaggtgctgaccctgtgcgggggcgtgtccctcggcccgcagatcgcg
tccctggaacacggtgcccacgtcatcgtcggcaccccgggccgcatccagcaacacctg
cgcaagggctcgctggtactcgacggcttgaacaccctgatcctcgacgaagccgaccgc
atgctcgacatgggcttctacgacgccatcgaagacatcatcagcaagaccccaccgcgc
cgccagaccctgctgttctcggccacttacccggtgagcatcaagcaactggcctccaag
ttcatgcgtgcgcctcagcaagtgaaagccgaagcgttccactccgacgaccagatcgag
cagcgtttctacgagatctcgccgcaagagcgcatggacgcggtgagcaaggtcctcgcg
cacttccgtccagcctcctgcgtggcgttctgctttaccaagcagcaagtgcaggaaacc
gtggatcacctgacggccaagggcatttccgccgtcggcctgcatggcgacctggagcag
cgcgaccgtgaccaggtgctggcgatgttcgcaaaccgcagcacctcggtactggttgcc
accgacgttgccgctcgcggcctggacattgatgcgctggacatggtgatcaacgtcgaa
ctggcccgcgactcggaaatccacatccaccgcgtgggccgcaccggccgcgccggtgag
accggcatcgccatcagcctggtcgcgccgtccgaagcccaccgcgcccaggccatcgag
cagttgcagaaatcgccgctgaactgggaccagttggacaacctcaagccgcaaggcggt
ggcccgttgctgccgcagatgagcaccttgtgtatcgccgccgggcgtaaagacaaggtt
cgcccaggtgacattcttggcgcgttgactggcgaagccggcatcccgggcgcccaggtg
ggcaagatcgcgatctttgatttccaggccttcgtggctgtggagcgtggcatcgccaaa
caggcgttgcagcggctgaatgacggcaagatcaagggccgttcgttgcgcgttcgcatt
ctgtaa
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