Pseudomonas asiatica: LG197_01065
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Entry
LG197_01065 CDS
T08841
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pasi
Pseudomonas asiatica
Pathway
pasi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pasi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LG197_01065 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pasi03019
]
LG197_01065 (pnp)
03016 Transfer RNA biogenesis [BR:
pasi03016
]
LG197_01065 (pnp)
Enzymes [BR:
pasi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LG197_01065 (pnp)
Messenger RNA biogenesis [BR:
pasi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LG197_01065 (pnp)
Transfer RNA biogenesis [BR:
pasi03016
]
Prokaryotic type
tRNA degradation factors
LG197_01065 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
KH_N4BP1_2nd
S1_2
Motif
Other DBs
NCBI-ProteinID:
WDM88703
LinkDB
All DBs
Position
complement(233793..235898)
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKTFQFGQSTVTLETGRIARQATGAVLVTVDNDVTVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFEGPIGAARVAFHESTGYLLNPTYEQLAASSLDMVV
AGTESAVLMVESEAKELTEDQMLGAVLFAHDEFQAVIQAVKELAAEAGKPTWDWQPAPAN
VELMNLVRAEFGEAVSQAYTITQKADRYNRLGQLRDEAVARLSNEETGPSAGAIKEIFGE
LEYRTVRENIVNGKPRIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRGVQAMLPSDS
EFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGDKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKINGITEEIMEIALGQALEARLNILGQMNQ
IIAQSRSELSANAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAADAAKQRILGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaagacattccagttcggtcagtcgaccgttactctcgaaacgggc
cgtattgcccgtcaggcaaccggcgccgtgctggttaccgtcgacaacgacgtcaccgtg
ctggtgaccgtggtcggtgccaaacaggccgatccaggcaagggcttcttcccgctgtcg
gtccactaccaggaaaagacctacgccgccggcaagatcccgggtggcttcttcaagcgt
gaaggccgtccttccgagaaagagaccctgacctcgcgcctgatcgaccgtccgatccgt
ccgctgttcccggaaggcttcatgaacgaagtgcaggttgtctgcaccgtggtttccacc
agcaagaagaccgacccggacatcgctgcgatgatcggtacctcggccgccctggccatc
tccggcattcctttcgaaggcccgatcggcgccgctcgcgttgccttccacgaaagcacc
ggctacctgctgaacccgacctacgagcaactggctgcctcgagcctggacatggtcgtt
gccggtaccgaatcggctgtactgatggttgagtcggaagccaaagagctgaccgaagac
cagatgctgggcgccgtgctgttcgcccacgacgaattccaggccgtgatccaggccgtc
aaggaactggctgccgaagccggcaagccgacctgggactggcagccagccccggccaac
gtcgagctgatgaacctggtacgcgccgagttcggcgaagccgtttcgcaggcctacacc
atcacccagaaggctgaccgctacaatcgcctgggccagctgcgcgacgaggctgttgcc
cgtctgagcaacgaagagaccggcccgtccgccggcgccatcaaggaaatcttcggcgag
ctggaataccgcaccgtccgtgagaacatcgtcaacggcaaaccgcgtatcgacggccgt
gacacccgcaccgtgcgcccgctgaacatcgaagtcggcgtcttgccaaagactcacggt
tcggcgctgttcacccgtggcgaaacccaggccctggtcgttgcgaccctgggtactgcc
cgtgacgcccagctgctggacaccctggaaggcgagaaaaaagacccgttcatgctgcac
tacaacttcccgccattctcggtgggtgagtgcggtcgcatgggcggcgctggccgtcgt
gaaatcggccacggccgcctggcccgtcgtggcgtgcaggccatgctgccgagcgacagc
gagttcccgtacaccatccgcgtggtatcggaaatcaccgaatccaatggttccagctcc
atggcttcggtctgtggtgcttccctggccctgatggacgctggtgtaccgatgaaggca
ccggttgccggtatcgccatgggcctggtcaaggaaggtgacaagttcgccgtcctgacc
gacatcctgggtgacgaagaccacctgggcgacatggacttcaaggtagccggtaccgcc
aagggtgttaccgcgctgcagatggacatcaagatcaacggtatcaccgaagagatcatg
gagatcgccctgggccaggccctggaagcgcgcctgaatatcctcggccagatgaaccag
atcatcgcccagtcgcgtagcgagctgtcggccaacgccccgaccatgatcgcgatgaag
atcgacaccgacaagatccgtgacgtcatcggtaaaggcggcgccaccattcgcgccatc
tgcgaagagaccaaggcttcgatcgacatcgaagacgatggctcgatcaagatcttcggc
gaaaccaaggaagcggcagatgctgccaagcaacgcatcctgggcattaccgccgaagcc
gagatcggcaagatctacgtcggcaaggtcgagcgcatcgtcgacttcggtgcgttcgta
aacatcctgcctggcaaggacggcctggtgcacatctccatgctgagcgatgctcgcgtc
gagaaagtcaccgacatcctgaaagaaggccaggaagtcgaagtactggtactggacgtg
gataaccgcggccgtatcaagctgtcgatcaaggacgttgccgcggcgaaggcctcgggc
gtctaa
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