Pseudomonas asiatica: LG197_03145
Help
Entry
LG197_03145 CDS
T08841
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pasi
Pseudomonas asiatica
Pathway
pasi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pasi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LG197_03145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pasi03400
]
LG197_03145
Enzymes [BR:
pasi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LG197_03145
DNA repair and recombination proteins [BR:
pasi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LG197_03145
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_16
Zn_ribbon_6
iSirtuin
AAA_30
HypA
TrwB_AAD_bind
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WDM89094
LinkDB
All DBs
Position
706389..708608
Genome browser
AA seq
739 aa
AA seq
DB search
MSDVILRLALPSPLRRLFDYKAPASMARQALTPGMRIRVPFGRREMIGVLVEVCEQSEVP
ADKLKPASALLDPVSPIPPSLFKLCLWTAQYYQHSLGDTLSWALPTLLRQGEPSEMRQER
FWHVAPGARLEDPRIARAPRQRDALKTLAQHPHGVAHSLLAKLNLNKDSLDLLLAKDLVQ
IEVRRHLPALRHEHWLAQPELPLNEEQRDAFDAVREGFGGFGAFLLAGVTGSGKTEVYLQ
LIRETLEAGKQALVLIPEINLGPQTLARFEQRFNARIALLHSAVNDRERLDAWLAARDGE
ADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRAHQENVPILLGS
ATPSLETLHNALTGRYRLLRMNQRAGGARPPRMLRLDVKSLPLDSGISGPLQQAIRQTLE
AGQQVLVFLNRRGFAPTLLCHDCGWLSECPRCDARMTVHQRSGVLRCHHCGYDERLPQQC
PQCNHVDLRPVGAGTERAEERLKVLFPDYPILRVDRDSTARKDAMHNLFSTIQRGQPSIL
VGTQMLAKGHHFPRVTLVAILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGKVII
QTHLADHPLLVQLTEQGYFAFAEQALDERRAAGLPPYSHLALLRAEAHKPGQAEGFLDEA
CAAAERLVAEQRLPGIELLGPVPAPMERRAGRFRAQLLIQANTRAPLHRLISAWLLVLEQ
MPSGRQVRWSLDVDPVDLY
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgacgtcatcctgcgccttgccctgccctccccgctgcgtcgcctgttcgactac
aaggcgccggcaagcatggcgcgccaggccttgactccgggcatgcgcattcgcgtgcca
ttcggccgccgcgaaatgatcggcgtgctggtggaggtgtgcgagcagagcgaagtgccc
gccgacaagctcaagccggccagcgccctgctcgacccggtatcaccgatcccgccgtcg
ctgttcaagttgtgcttgtggaccgcccagtactaccagcacagcctgggtgacaccctg
agctgggccttgccgaccctgctgcgccagggcgaaccctccgagatgcgtcaggagcgc
ttctggcacgtcgcccccggcgcccgcctggaagacccgcgcatcgcccgcgcaccgcgc
cagcgcgatgccctcaagaccctggcccagcacccgcacggcgtggcccatagcctcctg
gccaagctcaatctgaacaaggacagcctggacctgctgctggccaaggacctggtgcag
atcgaggtccgccgccatctgccggcactgcgccacgaacactggctggcacagccggaa
ctaccgctcaacgaagagcaacgcgatgccttcgacgccgtgcgcgaaggctttggcggc
tttggcgccttcctgctggccggtgtcaccggcagcggcaagaccgaggtgtacctgcaa
ctgatccgcgaaacactggaagccggcaagcaggccctggtactgatcccggagatcaac
ctcggcccgcagaccctggcccgcttcgagcagcgcttcaacgcccgcatcgccctgctg
cattcggcggtgaacgaccgcgaacgcctggatgcctggctggcagcccgggacggcgag
gccgacatcatcatcggcacccgctcggcactgttcacgccgatgaagaaccccggcctg
atcatcatcgacgaggagcacgacggctcctataaacagcaggaaggcctgcgctaccac
gcccgcgacctggcactggtgcgcgcccaccaggaaaacgtcccgatcctgctcggttcc
gccacgccatcgctggaaaccctgcacaatgccctgaccggtcgctaccgcctgttgcgc
atgaaccagcgcgccggcggtgcccgcccgccacgcatgctgcgcctggatgtgaagagc
ctgccgctggacagcggtatcagcggcccactgcagcaggccatccgccaaaccctggag
gcaggccagcaagtgctggtattcctcaatcgccgcggtttcgccccgaccttgctgtgc
catgattgcggctggctgtccgaatgcccacgctgcgatgcacgcatgaccgtgcaccag
cgctccggcgtgctgcgctgccaccattgcggctatgacgagcgcctgccgcagcagtgc
ccgcagtgcaaccatgttgacctgcgcccggtcggcgccggcaccgagcgtgccgaggag
cgcctgaaagtgctgttcccggattacccgatcctgcgtgtggaccgcgacagcaccgcg
cgcaaggacgccatgcacaacctgttcagcaccatccagcgcggccagccgagcatcctc
gtcggcacccagatgctcgccaagggccatcacttcccgcgggtgaccctggtggccatc
ctcgatgccgatggcgggctgttctccggcgacttccgtgccagcgaacgcatggcacag
ttgatcgtgcaggtcgccgggcgggccgggcgggccgaagagcccggcaaggtcatcatc
cagacccacctggccgaccatccactgctggtgcagcttaccgagcagggctacttcgcc
ttcgccgagcaggccctggacgaacgccgcgccgccgggctgccgccttactcgcacctg
gcgctgctacgcgccgaagcgcacaagcccgggcaggccgaaggtttcctcgacgaggcc
tgcgccgccgccgagcgcctggtggccgaacagcgcctacctggcatcgagctgctgggg
ccggtgccagcaccgatggagcgccgcgccgggcgcttccgcgcacaactgttgatacag
gccaatacgcgggcgcctttgcatcgactgatcagcgcctggttgctagtgttggagcag
atgccgagcgggcgccaggtgcggtggtcgctggatgtcgacccggtagacctttattga
DBGET
integrated database retrieval system
