Pseudomonas asiatica: LG197_05850
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Entry
LG197_05850 CDS
T08841
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
pasi
Pseudomonas asiatica
Pathway
pasi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pasi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LG197_05850
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pasi02000
]
LG197_05850
02044 Secretion system [BR:
pasi02044
]
LG197_05850
Transporters [BR:
pasi02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LG197_05850
Secretion system [BR:
pasi02044
]
Type I secretion system
Adhesin protein transporter
LG197_05850
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
DUF87
MMR_HSR1
AAA_29
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
WDM89599
LinkDB
All DBs
Position
complement(1282134..1284290)
Genome browser
AA seq
718 aa
AA seq
DB search
MESEVSRVQLSHDPRSQHDDPLLDSLLSLCVLHQKPASRVMLTTGLPLPAQRLSPELLPR
AAARAGLQGRLLQRKLEQIPGIAMPAMLLLKEGRSAVLLGWENEDTARLLLSESDGGEVH
VSREALQSDYSGRVFFAQPQHKFDVNHGNLIPRAKSWFRDTLLRSKWLYIDAIAASLVIN
LIALAAPLFVMNVYDRVVPNQATATLWVLAVGIAGAYIFDLILKGLRGLCLDLAGKKTDL
IISATLFERIVGMSMKYRPARVGSFAQNIHEFQGLRDFLASLTLTSLIDLPFTILILIVI
AIIGGHLVWIPIIAFPLALGIGYALQRPLMATMERTMALASERQSSLIETLAGLDAVKVN
NAESERQYMWEQTLGTLSRLELRVKVLSSLAMNITLLIQQLAGVAMICTGVYLIIDGNLS
MGGLVACYMLSGRALGPLGQLNGLLARYQQAKVTMVSTDHMMELPQERNFEERPLSRKVL
QGSVEFRGVDFTYPNQQNLALKNINLTIRPGEKVGIIGRSGSGKSSLAKLIVGLYEADGG
SLLVDGVDIRQIDVSELRHNIGYVPQDIQLLAGTLRDNLVSGARYIEDEMILQAAELAGV
HEFARLHPDGYELQVGERGQNLSGGQRQNVALGRALLLNPQILLLDEPTSAMDNTGEERL
KQRLQAVVENKTVLLVTHRASLLSLVDRLIVIDRGQIVADGPKAAVMDALKKGQISVA
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
gtggaatccgaagtcagtcgagttcaactcagtcacgatccacgcagtcagcatgacgat
cccctgctggatagtctgttgagcctgtgtgtcctgcatcagaaacccgccagccgggtc
atgctgaccaccggcctgccgctgcccgcccagcgcctgagccccgagctgctgccccgc
gccgccgcccgggctggcctgcaggggcgcctgctgcagcgcaagctggagcaaatcccg
ggcatcgccatgccggccatgctgctgctcaaggaaggtcgcagcgccgtcctgttgggc
tgggagaacgaagacaccgcgcgcctgctgctcagcgagagcgacggcggcgaggtgcat
gtcagccgcgaagccttgcaaagcgactacagtggccgggtgttcttcgcccagccgcag
cacaagttcgacgtcaaccacggtaacctcatcccgcgggccaagtcgtggttccgcgat
accctgctgcgcagcaagtggctgtacatcgatgccatcgccgccagcctggtgatcaac
ctgatcgccctggccgcgccgctgttcgtgatgaacgtgtatgaccgcgtggtgcccaac
caggccactgcgacgctttgggtgctggccgtcggcatcgccggcgcctatatcttcgac
ctgatcctcaagggcttgcgtggcttgtgcctggacctggccggcaagaagaccgacctg
atcatttcggcgacccttttcgaacgcatcgtcggcatgtcgatgaagtaccgcccggca
cgggtcggcagttttgcccagaacattcacgagttccagggcctgcgcgacttcctcgcc
tcgctgaccctgaccagcctgatcgacctgccgttcaccatcctgatcctgatcgtcatc
gccatcattggcgggcacctggtatggatcccgatcatcgccttcccgttggccctgggc
atcggctacgccctgcaacggccgctgatggcgaccatggagcggaccatggccctggcc
tcggagcgccaatccagcctgatcgagaccctggccggcctggatgcggtgaaggtcaac
aatgccgaaagcgaacgccagtacatgtgggagcaaaccctcggcaccctcagccgcctg
gaactgcgcgtgaaggtgctgtcgagcctggcaatgaacatcaccctgctgatccagcaa
ctggcgggcgtggcgatgatctgcaccggcgtgtacctgatcatcgacggcaacctgagc
atgggcggcctggtggcctgctacatgctcagtggccgggccctcggcccactgggccag
ctcaacggcctgctcgcccgctaccagcaggccaaggtgaccatggtctccaccgaccac
atgatggagctgccgcaagagcgcaacttcgaggagcggccactgagccgcaaggtgctg
cagggcagtgtcgagttccgcggggtcgacttcacctacccgaaccagcagaacctggcc
ctcaagaacatcaacctgaccatccgccccggtgaaaaggtgggcatcatcggccgcagc
ggctcgggcaagagctcgctggccaagctcatcgtcggcctgtacgaggccgatggtggc
tcgctgctggtcgatggcgtggacattcgccagatcgatgtcagcgaactgcgccataac
atcggctacgtcccccaggacatccagctgttggccggcaccctgcgcgacaacctggtc
agcggtgcccgctacatcgaggacgagatgatcctgcaggcggccgagctggccggcgtg
catgagttcgcccggctgcacccggacggttacgagctgcaagtgggtgagcgcgggcag
aacctgtccggcggccagcggcagaacgttgccctgggccgtgcgctgctgctcaacccg
cagattctgctgctggacgagccgaccagcgccatggacaacaccggtgaagaacgcctc
aagcaacgcctgcaagcggtggtggaaaacaagacggtactgctggtcacgcaccgtgcc
tcgctgctgtcgctggtggaccggttgatcgtcatcgatcgcgggcagattgtcgccgac
ggcccgaaagccgcggtcatggatgcgctgaagaaggggcagatcagtgtcgcataa
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