KEGG   Pseudomonas asiatica: LG197_06415
Entry
LG197_06415       CDS       T08841                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pasi  Pseudomonas asiatica
Pathway
pasi02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pasi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LG197_06415
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pasi02022]
    LG197_06415
Two-component system [BR:pasi02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   LG197_06415
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_50 AAA_2 FleQ HTH_8 AAA AAA_16 HTH_24 sCache_3_2 DUF6716 HTH_10
Other DBs
NCBI-ProteinID: WDM89707
LinkDB
Position
complement(1422055..1423461)
AA seq 468 aa
MTTETLIDSRAQVILVDDDPHLRQALSQTLDLAGLKVVALADAQGLAERIEADWPGVVVS
DIRMPGIDGLQLLEQLHGRDNELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDALLD
SVRRALALRRLVLDNRSLRLALSDRQQLATRLVGQSPSMQRLREQIGALAGTRADVLILG
ETGAGKEVVARALHDLSSRRDGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKF
EFANGGTLFLDEIESMSLDVQVKLLRMLQERVVERLGGNQLIPLDIRIIAATKEDLRQSA
DQGRFRADLYYRLNVAPLRIPPLRERGDDILVLFQHFADAASERHGLPPHSLQPAQRAML
LRHDWPGNVRELQNAAERFALGLELALDGQAPPAAMPSAPMPSGNLSEQVEQFERSLIAA
ELAQPHSSMRSLAEALGIPRKTLHDKLRKHGLSFDGGSGGHDDQEDNR
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgaccaccgagacactgatcgacagccgagcccaggtcatcctggtcgatgatgacccg
caccttcgccaggccctgagccagaccctggacctggccgggctcaaggtggtcgccctg
gccgacgcccagggcctggccgaacgcatcgaggccgactggcccggcgtggtggtcagc
gacatccgcatgccgggtatcgatggcctgcagctgctggaacaactgcacggccgtgac
aacgagctgccggtattgctgatcaccggccacggtgatgtgccgctggcggtgcaggca
atgcgcgccggggcttatgacttcctggaaaaaccctttgccagcgacgccctgctggac
agcgtgcgccgcgccctggccctgcgccgcctggtgctggacaaccgcagcttgcgcctg
gccctgagcgaccgccagcaactggccacccgcctggtgggccagtcgccgtccatgcag
cgcttgcgcgagcagatcggcgccttggccggcactcgcgccgacgtgctgatcctgggt
gagaccggtgccggcaaagaggtggtggcccgcgccctgcacgacctgtccagccgccgc
gacgggccgttcgtggcgatcaacgccggcgcactggccgagtcggtggtcgaaagcgag
ctgttcggccatgagcccggggcgttcaccggcgcgcagaaacgccgcatcggcaagttc
gagttcgccaacggcggcacgctgttcctcgacgaaatcgagagcatgagcctggatgtg
caggtgaaactgctgcgcatgcttcaggaacgggtggtcgagcgcttgggtggcaaccag
ctgatcccgctggacatccgcatcatcgccgcgaccaaggaggacctgcgccagtccgct
gaccaagggcggttccgcgccgatttgtattaccgcctgaacgtggcgccgctgcgtatt
ccaccgctgcgcgaacgcggcgatgacatcctggtgcttttccagcacttcgccgacgcc
gccagcgagcgccatggtctgccgccacactccctgcagccggcccagcgcgccatgctg
ctgcgtcacgactggcccggtaacgtacgcgagctgcagaacgccgccgagcgtttcgcc
cttggcctggaactggctctggacggccaggcgccgccggcggcaatgccttcggcaccg
atgccgagcggcaacctcagcgaacaggtcgagcagttcgaacgctcgctgatcgctgcc
gaactggcccagccacacagctccatgcgcagcctggccgaggcgctgggtatcccccgc
aaaaccttgcacgacaagctgcgcaagcatggcttgagcttcgatggcggtagcggcggg
catgacgatcaagaggacaaccgttaa

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