Pseudomonas asiatica: LG197_06585
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Entry
LG197_06585 CDS
T08841
Symbol
choW
Name
(GenBank) choline ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
pasi
Pseudomonas asiatica
Pathway
pasi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pasi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LG197_06585 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pasi02000
]
LG197_06585 (choW)
Transporters [BR:
pasi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
LG197_06585 (choW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
DUF5455
Motif
Other DBs
NCBI-ProteinID:
WDM91161
LinkDB
All DBs
Position
complement(1459070..1459918)
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AA seq
282 aa
AA seq
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MMLIDQKIPLGQYIASFVEWLTQNGANYFDAIAQGLEFMIHGVTSALTFFNPFVLIALFA
ALAHFIQRKWALTAFVALSFLLILNLGYWQETMETLAQVTFATVVCVAIGVPLGIVAAHK
PMFYTAMRPVLDLMQTVPTFVYLIPTLTLFGLGVVPGLISTVVFAIAAPIRLTYLGICDV
PQELMDAGKAFGCSRRQLLTRIELPHAMPSIAAGVTQCIMLSLSMVVIAALVGADGLGKP
VVNALNTADISLGFEAGLAIVLLAIMLDRICKQPDLPVRGEA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atcatgcttatcgatcagaaaatacccctgggccagtacatcgcgtcgttcgtcgagtgg
ctgacccagaacggcgcgaattacttcgacgccatcgcgcaaggcctggagttcatgatc
catggcgtaaccagtgccctgactttcttcaatccgttcgtgctcatcgctctgttcgcc
gccctggcgcatttcatccagcgcaagtgggcgctgaccgcattcgtcgccctgtcgttc
ctgctgatcctcaacctgggttactggcaggaaaccatggaaaccctggcgcaggtcacc
ttcgccacggtggtttgcgtggccatcggcgtgccactgggcatcgtcgccgcgcacaaa
ccgatgttctataccgccatgcgcccggtactcgacctgatgcagacggtacctaccttc
gtctacctgatccccaccctgaccctgttcggcctgggtgtggtgccggggctgatctcg
acagtggtgtttgccatcgccgcgccgatccgtctcacgtatctgggcatctgcgacgtc
ccgcaggagctgatggatgccggcaaggcatttggctgctcacggcgccagctgctcacc
cgtatcgaactgccgcacgcgatgccaagcatcgccgccggcgttacccagtgcatcatg
ctgtcgctatcgatggtggtgatcgccgccctggtcggcgctgacggcctgggcaaacct
gtggtcaacgcactgaacaccgccgatatttccctgggcttcgaagcgggcctggcgatc
gtgctgctggcgatcatgctcgaccgtatctgcaagcaaccggacctgccggtaaggggt
gaagcatga
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