Pseudomonas asiatica: LG197_07815
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Entry
LG197_07815 CDS
T08841
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pasi
Pseudomonas asiatica
Pathway
pasi00900
Terpenoid backbone biosynthesis
pasi01100
Metabolic pathways
pasi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pasi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
LG197_07815 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pasi01006
]
LG197_07815 (ispA)
Enzymes [BR:
pasi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
LG197_07815 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
LG197_07815 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
LG197_07815 (ispA)
Prenyltransferases [BR:
pasi01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
LG197_07815 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
WDM89967
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All DBs
Position
complement(1720585..1721472)
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AA seq
295 aa
AA seq
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MIGTYQASCQARVDAALEPLFVAPTKELERLYAAMRYSVMNGGKRVRPLLAYAACEALGA
PAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLA
FSALLDPRLSPQDDNIRLAMVQVLAKAAGPAGMVGGQAIDLGSVGLKLDQQALEFMHRHK
TGALIEASVRLGALASARAEQAQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGA
DIARDKPTYPALLGLEAAKAYAIELRDQALVALQGFGEKAEPLRALARYIVERRN
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcacctaccaggccagctgccaggcgcgagtcgatgccgccctcgaaccgttg
ttcgtcgccccgaccaaggaactcgaacgcctttacgccgccatgcgctacagcgtgatg
aacggtggcaaacgcgttcgtccgctgctggcttacgcggcctgcgaagcattgggcgcc
ccggccgaacaggccaacggcgcagcctgtgcggtggaactgatccacgcgtactcgctg
gtgcatgacgacctgccggccatggatgacgacgacctgcgccgcggccagccgaccacc
cacaaagccttcgatgaagcctgcgcgatcctcgccggcgacggtttgcagagtctggcc
ttcagcgccttgctcgacccgcgtctgagcccgcaggatgacaacattcgcctggccatg
gtccaggtcctggccaaggctgccggcccggcaggcatggtcggtggccaggccatcgac
ctgggctcggttggcctgaagctggaccagcaggcgctggagttcatgcaccggcacaag
accggcgcgctgatcgaagccagcgtgcgcctcggcgccctggccagcgcccgcgccgaa
caggcgcaactggatgccttgcagacctatgcacaggccatcggcctggcgttccaggtg
caggacgacatccttgacgtggaaagcgacactgcgaccctgggcaaacgccagggggcc
gatatcgcccgtgacaaaccgacctacccggcgcttctgggcctggaagcggccaaggcc
tatgcgatcgaactgcgcgaccaggcgctggtcgcactgcaagggttcggcgaaaaggcc
gaaccgctgcgggcgttggcgcgttacatcgtcgaacgccgcaactga
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