Pseudomonas asiatica: LG197_08550
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Entry
LG197_08550 CDS
T08841
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pasi
Pseudomonas asiatica
Pathway
pasi00260
Glycine, serine and threonine metabolism
pasi00460
Cyanoamino acid metabolism
pasi00630
Glyoxylate and dicarboxylate metabolism
pasi00670
One carbon pool by folate
pasi00680
Methane metabolism
pasi01100
Metabolic pathways
pasi01110
Biosynthesis of secondary metabolites
pasi01120
Microbial metabolism in diverse environments
pasi01200
Carbon metabolism
pasi01230
Biosynthesis of amino acids
pasi01240
Biosynthesis of cofactors
pasi04981
Folate transport and metabolism
Module
pasi_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pasi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LG197_08550
09102 Energy metabolism
00680 Methane metabolism
LG197_08550
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LG197_08550
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LG197_08550
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LG197_08550
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LG197_08550
Enzymes [BR:
pasi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LG197_08550
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
WDM90097
LinkDB
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Position
complement(1878395..1879648)
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AA seq
417 aa
AA seq
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MFSRDLTIAKYDAELFEAMQQEALRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANAAVYLALLSAGDTILGMS
LAHGGHLTHGASVSSSGKLYNAIQYGIDSNGLIDYDEVERLAVEHKPKMIVAGFSAYSQV
LDFARFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARKNEEIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKAYQQQVVKNAQAMASV
FIERGFDVVSGGTQNHLFLLSLIKQEISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECRELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYGN
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgaccattgccaagtacgacgccgagctcttcgaagccatgcag
caagaagctctgcgccaggaagagcatatcgagctgatcgcttcggaaaactacaccagc
ccggcagtcatggaggcccagggctcggtcctgaccaacaagtacgccgaaggctaccca
ggcaagcgctactacggtggttgcgagtacgtcgacgtcgtcgagcagctggccatcgac
cgtgccaaggaactgttcggcgccgactacgccaacgtccagccgcacgccggctcccag
gccaacgccgccgtctacctggccctgctgtcggccggtgacaccatcctgggcatgagc
ctggcccacggtggtcacctgacccacggtgcttcggtaagctcctcgggcaagctgtac
aacgccatccagtacggcatcgacagcaacggcctgatcgactacgacgaagtcgagcgc
ctggctgtcgagcacaagccgaagatgatcgttgccggcttctcggcctactcgcaggtg
ctggacttcgcccgcttccgcgccatcgccgacaaggtcggtgcctacctgttcgtcgac
atggcccacgttgccggcctggttgccgctggcgtgtacccgaaccctgttccgttcgcc
gacgtggtcaccaccaccacccacaagaccctgcgcggcccgcgcggcggcctgatcctc
gctcgcaagaacgaagagatcgagaagaagctgaactccgccgtcttccctggcgcccag
ggtggcccgctggagcacgtcatcgctgccaaggccatctgcttcaaggaagccctgcag
cctgagttcaaggcttaccagcagcaggtcgtgaagaacgcccaggccatggccagcgtg
ttcatcgagcgtggtttcgacgtggtttccggtggcacccagaaccacctgttcctgctg
tcgctgatcaagcaggaaatctccggcaaggacgctgacgccgccctgggcaaagccttc
attaccgtcaacaagaactcggtaccgaacgacccacgttccccgttcgtcacctcgggc
ctgcgtttcggcaccccagccgttaccacccgtggtttcaaggaagccgagtgccgcgag
ctggctggctggatctgcgacatcctggctgacctgaacaacgaagcggttatcgacgcc
gtgcgtgaaaaggtcaaggccatctgcaagaagctgccggtttacggcaactga
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