Pseudomonas asiatica: LG197_09140
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Entry
LG197_09140 CDS
T08841
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pasi
Pseudomonas asiatica
Brite
KEGG Orthology (KO) [BR:
pasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pasi03400
]
LG197_09140 (phrB)
Enzymes [BR:
pasi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LG197_09140 (phrB)
DNA repair and recombination proteins [BR:
pasi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LG197_09140 (phrB)
Prokaryotic type
LG197_09140 (phrB)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WDM90200
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All DBs
Position
complement(2004184..2005626)
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AA seq
480 aa
AA seq
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MHLTWLRSDLRIDDNTALAAASERGPTLALWLVSPGQWLAHDDAACKVDFWLRSLRDLRQ
SLERLNIPLLIRRIDTWDQAPQAVLDVCRQHQVQSVHWNEEYGINEQRRDDATRALLEKS
SIQAHSHLDQLLFRPGTILTRSGDYFQVFSQFKKSCLEHLHRSLPALARQIKRQAPLHVS
SDPIPQHVDGFEKPAQALRDHWPAGEAEAKARLTRFLDETIDDYQQLRDLPAKPGTSQLS
AYLAAGMISPRQCLHGALASNRGEFDSGSSGVQTWINELLWREFYKHILTGYPQVSRHRA
FRAQTEALPWRDAPADLEAWEQGRTGFPIIDAAMRQLLHTGWMHNRLRMIVAMFLSKNLL
IDWRKGERHFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRIFNPVSQSQRFDPQGRFIR
HWLPELQGVDEKAIHFPVKSADLFARYSYHSPIVDLDSSRQRALEAFKNLPRRQDQRAAS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgacctggctgcgcagcgacctgcgcatcgatgacaacaccgcgctagccgcc
gccagcgaacgcggcccgaccctcgcactgtggctggtcagccccgggcaatggctggcc
cacgacgacgccgcctgcaaggtcgacttctggctgcgcagcctgcgcgacctgcgccag
tcgctggagcgcttgaacatccccctgctgatccgcaggatcgacacttgggaccaggcg
ccacaggccgtactcgacgtctgccgccaacatcaggtgcaaagcgtgcactggaacgag
gagtacggcatcaacgagcaacgtcgcgacgacgccacccgcgcgctgctggaaaagtcg
tccatccaggcccacagccacctcgaccagctgttgttccgccctggcaccatccttacc
cgcagcggcgactacttccaggtgttcagccagttcaagaagagctgcctggagcacctg
caccgcagcctccctgccctggcccgccagataaaacgccaggcaccgctgcatgtcagc
agcgacccgatcccacagcacgtggacggcttcgaaaaacccgcgcaggcactgcgcgac
cactggccggccggcgaagccgaagcgaaggcgcggctgacccgttttctcgatgaaacc
atcgacgattaccaacagctgcgtgacttgcctgccaagcccggtaccagccagctctcc
gcctatctggccgccggcatgatctcgccacgccagtgcctgcacggtgccctggccagc
aaccgcggcgagttcgacagcggcagcagcggcgtgcaaacctggatcaacgagctgctc
tggcgcgaattctacaaacacatcctgaccggttatccacaggtctcgcgtcaccgagcc
ttccgcgcccagaccgaagccctgccctggcgcgatgcaccggccgacctcgaagcatgg
gaacagggccgaaccggcttcccgatcatcgacgccgccatgcgccaactgttgcacacc
gggtggatgcacaaccgcctgcgcatgatcgtggccatgttcctcagcaagaacctgctg
atcgactggcgcaagggcgagcggcatttcatgcgccacttgatagacggcgacctggcc
gccaacaacggcggttggcagtggagcgcgtccactggcaccgacgcagtgccctatttc
cgcatcttcaacccggtttcacagtcgcagcgattcgacccgcaagggcgtttcattcgg
cactggctgccggaattgcagggggtagatgaaaaagccattcatttccccgtgaagtcg
gccgatctttttgctagatattcctaccacagtccaattgtcgatctcgacagcagtcgt
cagcgcgcactggaggcattcaagaacctcccgcgccggcaggatcagagggcagcatct
tga
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