Pseudomonas asiatica: LG197_11205
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Entry
LG197_11205 CDS
T08841
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pasi
Pseudomonas asiatica
Brite
KEGG Orthology (KO) [BR:
pasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pasi03016
]
LG197_11205 (truD)
Enzymes [BR:
pasi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
LG197_11205 (truD)
Transfer RNA biogenesis [BR:
pasi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LG197_11205 (truD)
Prokaryotic type
LG197_11205 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WDM90595
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All DBs
Position
2452573..2453631
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AA seq
352 aa
AA seq
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MTELELLGPRASGEPLGTAVLKAVAEDFQVDEVLDIPLSGQGEHLWLWVEKRDLNTEEAA
RRLARAAGVPVRTISYAGLKDRQALTRQWFSLHLPGKADPDLSRAEDASLRVLKQVRHQR
KLQRGAHSANGFTLRLTALAADHQAVDARLEQLKQYGVPNYFGTQRFGHGGGNVHDALDW
AARNALPEQRNVRSRLLSAGRSYLFNQVLAARVADGSWARAQVGDLLAFTTSRSFFPAGE
SECSDPRLAILDLHPTGPLWGAGDSPATGSTAQQEDAIAARQPALCQWLALAGMDHERRI
LRLPIGGLTWHYPEPDILQLEFVLPAGCFATVVVREIVDLVSAGQTDSSCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaactggaactgttgggcccgcgtgcatcgggcgaaccactgggtaccgccgtt
ctcaaggcagtggccgaagatttccaagtcgacgaagtgctggacatcccgctgtcggga
cagggcgagcacttgtggctgtgggtcgaaaagcgtgacctgaacaccgaggaggcggcc
cgccgcctggcccgtgccgcaggggtgccggtgcgcacgatcagctacgccggcctcaag
gaccgccaggccctgacccgccagtggttcagcctgcacctgcccggcaaggccgacccg
gacctgtcgcgtgccgaggatgccagcctgcgtgtgctcaagcaggtgcgccaccagcgc
aagctgcagcgcggtgcgcattcggccaatggcttcacgctgcgcctgactgccctggct
gccgatcaccaagcggtggatgcgcgcctggaacagctcaagcagtacggtgtgccgaat
tatttcggcacccagcgcttcggccacggtggcggcaacgttcacgacgctcttgattgg
gccgcacgcaatgccctgcccgaacagcgcaacgtgcgttcgcggttgctctcggccggg
cgcagctacctgttcaaccaggtgctggcagcccgtgttgccgacggcagctgggcgcgt
gcgcaggtgggcgacctgttggcgttcaccacgagtcgtagcttctttcctgctggggag
tcggaatgttccgatcctcggctggcgattcttgacctgcatccgaccggcccgctgtgg
ggggcaggcgattcgccggctacggggagtactgcgcaacaagaggatgcgatcgccgca
cggcagccggcactttgccagtggctggccctggcgggcatggatcacgaacgacgcatt
ctgcggctccctattggcggtcttacgtggcattatcccgagcctgatatcctgcaactg
gaattcgtccttccggccggatgtttcgccaccgtggtggtgcgcgaaatcgtggatctg
gtgtcggcggggcagacggacagctcatgcgtattctga
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