Pseudomonas asiatica: LG197_13060
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Entry
LG197_13060 CDS
T08841
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pasi
Pseudomonas asiatica
Brite
KEGG Orthology (KO) [BR:
pasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pasi03400
]
LG197_13060
DNA repair and recombination proteins [BR:
pasi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LG197_13060
Archaeal homologous recombinant proteins
LG197_13060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Mesothelin
Motif
Other DBs
NCBI-ProteinID:
WDM90927
LinkDB
All DBs
Position
complement(2848781..2850019)
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AA seq
412 aa
AA seq
DB search
MRLFHTSDWHLGQSLHGQERDFEHACFLDWLLGQLRLRQPDALLIAGDIFDTVNPPVKAQ
ERLYDFIVQAHEQQPKLDIVMIAGNHDSGSRIELPAALMRRLRTHALGRVHWLDEGQLDA
ERLLIPLTNGRGKVAAWCLALPFLRPAEVTGPQLGDDYLQGITQVHQQLIAAAQKKRKKD
QALIAISHAHMAGGAVSEDSERSLIIGNAEALPAKLFDKAISYVALGHLHKPQKVNREER
IRYSGSPIPLSFAEINYPHQVLEVELDGTGLVSVEPRPVPRAVALQRVGPAPLGELLEQL
AELPVIDLLEDPNRQPWLEVRVILDEPQPDLRQQIETALQGKAVRLIRISAEYAGRNNAE
DDDLAFVELAQMTPQDLFSRAWEQAYGNPADEQALADFALLLQDVQQEEEQP
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttcatacctccgactggcacctgggccaaagcctgcacggccaggaacgc
gacttcgaacacgcctgcttcctcgactggctgctcggccagctgcgcctgcgccagccg
gatgcgctgctgatcgccggcgatatcttcgacacggtcaacccgccggtcaaagcccag
gaacgtctctacgacttcatcgtccaggcccacgagcaacagccgaagctggacattgtg
atgatcgctggcaaccacgactccggctcgcgcatcgagctgcccgcggcgctgatgcgc
cgcctgcgcacccatgccctgggccgtgtgcactggctggacgagggccagctggatgcc
gagcgcctgctgattccgctgaccaacggccgtggcaaggtcgccgcctggtgcctggcc
ctgcccttcctgcgcccggccgaggtgaccggcccgcaactgggtgacgactacctgcaa
ggcattacccaggtgcaccagcaactgatcgccgccgcgcaaaagaagcgcaagaaggac
caggcgctgatcgccatcagccacgcgcacatggccggtggcgcggtgtcggaggactcc
gaacgcagcctgatcatcggcaacgccgaagcgctgccggccaagctgttcgacaaggcc
atcagctacgtcgccctgggccacctgcacaagccgcagaaggtcaaccgcgaagaacgc
atccgctacagcggctcgccgatcccgctgtcgttcgccgaaatcaactacccgcaccaa
gtgctggaagtggagctggacggcactggcctggtcagcgtcgaaccgcgcccggtaccg
cgcgccgtggccctgcaacgggtcggcccggcaccactgggcgaactgctggagcagttg
gccgagctgccagtgatcgacctgctcgaagaccccaaccgccagccctggctggaggtg
cgggtgatactggatgagccgcaacccgacctgcgccagcagatcgaaaccgcactgcaa
ggcaaggccgtgcgcttgatccgcatcagtgccgaatacgccggccgcaacaatgccgaa
gacgatgacctggcctttgtcgaactggcccagatgaccccgcaggacctgttcagccgc
gcctgggagcaggcctatggcaaccccgccgacgaacaggcgctggccgacttcgccctg
ctgttgcaggacgtgcagcaggaagaggaacagccatga
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