Pseudomonas asiatica: LG197_14290
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Entry
LG197_14290 CDS
T08841
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pasi
Pseudomonas asiatica
Brite
KEGG Orthology (KO) [BR:
pasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pasi03032
]
LG197_14290
03036 Chromosome and associated proteins [BR:
pasi03036
]
LG197_14290
03400 DNA repair and recombination proteins [BR:
pasi03400
]
LG197_14290
DNA replication proteins [BR:
pasi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LG197_14290
Chromosome and associated proteins [BR:
pasi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LG197_14290
DNA repair and recombination proteins [BR:
pasi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LG197_14290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Barstar
Motif
Other DBs
NCBI-ProteinID:
WDM85827
LinkDB
All DBs
Position
3127399..3127671
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIDAIAASADIPKAVAGRALDAVIESVTGALKQGDDVVLVGFGTFSVKERAERTG
RNPQTGNAIKIAAAKVPGFKAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtcggaactgattgacgctatcgccgcatctgctgacatcccgaaagctgta
gccggccgtgcgctggacgcagtcatcgaatccgtcaccggcgccctgaagcaaggtgac
gatgtggtactggttggcttcggtaccttctcggtcaaggagcgtgcagagcgcaccggc
cgcaacccgcaaaccggtaacgcgatcaagatcgctgccgccaaggttccaggcttcaag
gctggcaaaggcctgaaagacgccgtcaactaa
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integrated database retrieval system
