Pseudomonas asiatica: LG197_16050
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Entry
LG197_16050 CDS
T08841
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pasi
Pseudomonas asiatica
Pathway
pasi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pasi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LG197_16050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pasi02000
]
LG197_16050
Transporters [BR:
pasi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LG197_16050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_11
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
WDM86153
LinkDB
All DBs
Position
complement(3518058..3519101)
Genome browser
AA seq
347 aa
AA seq
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MTHKQRLLALFCTVPGLFACLPAMAQPTLYLGMNGGTMERLFSDNILPKFEQANGVKVVI
VPGTSADILAKVQATPNKPSIHVMVLDDGIMYRAIGMGLCSTLKPNPTLAQLPEKALIKD
KAAAVSLGVTGLAYNSRLFKANGWAAPTSWNDLADPRFKDKVVFQSMASSTFGLHGFLMY
NRLHGGSDTDVNPGFTAWQKNVGPNVLEYIPNSAKLSEMVQTDEAALFPLTPTQVTALKL
KGIPVEYAAPKEGAVVLNQAECVTANNDQPELAQKLAEFLLSPEAQSPALELGDQIPSNP
NTPTSDKTRGQVEAMQTYLQTAVTIDWDQVNTQRPEWNARWNRQIER
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacaagcaacgtttgctcgccctgttctgcaccgtgcccggcctgttcgcctgc
ctgcccgccatggcccaacccacgctgtacctgggcatgaacggcggcaccatggaacgg
ctgttcagcgacaatatcctgccaaagttcgagcaggccaacggcgtgaaggtggtgatt
gtccccggcacctcggccgacatcctggccaaggtccaggccacgccgaacaagccgtcg
atccatgtgatggtgctggatgacggcatcatgtaccgcgccatcggcatgggcctgtgc
agcacgctcaaacccaacccgaccttggcccagttgccggaaaaggccctgatcaaggac
aaggccgccgcagtcagcctgggcgtgaccgggcttgcctacaacagccgcctgttcaaa
gccaatggctgggcggcgcccacctcgtggaacgacctggctgacccgcgcttcaaggac
aaggtggtgttccagtcgatggcatcgtccaccttcggcctgcatggtttcctgatgtac
aaccgcctgcacggcggtagcgataccgatgtcaacccgggcttcacggcctggcagaag
aacgtgggcccgaacgtgctggaatacatccccaactcggccaagctctcggaaatggtg
caaaccgacgaagccgcgctgttcccgctcacccccacccaggtgacggcgctgaagctc
aaaggcatcccggtggagtacgccgcgcccaaggaaggtgccgtggtgctcaaccaggcc
gaatgcgtcacggccaacaacgaccagccggaacttgcgcagaagctcgccgagttcctg
ctcagccccgaggcgcagtcgccggcactggagctgggtgaccagatcccgtccaacccc
aacacccccaccagcgacaagacccgtggccaggtcgaagccatgcagacctacctgcag
actgccgtgaccatcgactgggaccaggtcaacacccagcgccccgaatggaacgcgcgc
tggaaccgccagatcgagcgataa
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