Pseudomonas asiatica: LG197_19830
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Entry
LG197_19830 CDS
T08841
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pasi
Pseudomonas asiatica
Pathway
pasi02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pasi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LG197_19830 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pasi02044
]
LG197_19830 (tssK)
Secretion system [BR:
pasi02044
]
Type VI secretion system
Imp/Vas secretion system core components
LG197_19830 (tssK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
WDM86853
LinkDB
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Position
4263475..4264818
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AA seq
447 aa
AA seq
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MSKQSRVMWSEGMFLLPQHFQYQDEFHQHQLAEATLRTTPFHWGVQVLQVDEDALANGSL
QLKRLKLVFPDGSLYDAPQHDPLPAARDLKDLLKANDLKVHAALKLPEPFGLNYVEDGQE
HKAARRFRKQFDTLPDLNEGELENEITSLRLNVVLLVDGDSLDGYSHCPLARLTRNSMGG
FNLDPHFVHPTLHLGSHETLAGIGKRLLGALQAKSKALSGRRRERADQIAEFGSSDVTLF
WLLNTVNRAHPQLAHLLAHPRLHPERLYLFLADLAGGLLTFTLDTQLSDIPEYDHHDPAA
SLVKLDEMIRVMLDNVVPNQCIVINLNQTKPSYWQGQLHDPRLTEADFYISVHADMPGAS
LLELVPRAFKVGSPEDIEVVVNSAMPGVTLNHAARLPNAIPVRLDNQYFAIEPHGHVYER
MMNAQTICFYAPSAFTNLKLELMAVLK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcagagccgggtgatgtggtcggaaggcatgttcctgctgccccagcacttc
cagtaccaggatgagttccaccagcaccagctggccgaggcgaccttgcgcaccacccca
ttccattggggtgtgcaggtactgcaggtggatgaggacgccctggccaacggttcgctg
cagctcaagcgactcaagctggtgttccctgacggcagcctttacgacgcaccgcagcac
gacccgttgccggctgcccgcgacctcaaggacctgctcaaggccaacgacctcaaggtt
catgctgccttgaagctgcccgagccattcggcctgaactatgtcgaggatggccaggaa
cacaaggccgcgcggcgtttccgcaagcagttcgataccctgcccgacctcaatgaaggc
gagctggaaaacgaaatcaccagcctgcgcctgaacgtggtgctgctggtggacggtgac
agcctggacggctacagccactgcccgctggccaggctgacccgcaacagcatgggcggt
ttcaatctcgacccgcatttcgtccaccccactctgcatctgggcagccacgagaccctg
gccggcatcggcaagcgcctgctcggcgccctgcaggccaagagcaaggccctgtccggc
cgacgccgcgaacgcgccgaccagatcgccgagttcggctccagcgacgtaaccctgttc
tggctgctgaacaccgtcaaccgcgcccacccgcagctggcccatctgctggcgcacccg
cgcctgcaccccgagcgcctgtacctgttccttgccgacctggcgggtggcctgctgacg
ttcaccctggacacccagctcagcgacatccccgaatacgaccatcacgacccggccgcg
tcgctggtcaagctcgacgagatgatccgggtgatgctcgacaacgtggtgcccaaccag
tgcatcgtcatcaacctcaaccagaccaagccgtcgtactggcagggccagttgcacgat
ccacgcctgaccgaggccgacttctatatctcggtccatgccgacatgcctggtgccagc
ctgctggagctggtaccgcgggcattcaaggtcggctcgccggaagacatcgaggtggtg
gtcaacagcgcgatgcccggcgtcacgctcaaccatgccgcacggctgcccaacgcaatt
ccggtgcgcctggacaaccagtacttcgccatcgagccgcatggccatgtctacgagcga
atgatgaatgcccagaccatctgcttctacgcgcccagcgcctttaccaacctcaagctt
gaactgatggcggtgctcaaatga
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