Pseudomonas asiatica: LG197_20140
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Entry
LG197_20140 CDS
T08841
Name
(GenBank) cyclic diguanylate phosphodiesterase
KO
K26148
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
pasi
Pseudomonas asiatica
Brite
KEGG Orthology (KO) [BR:
pasi00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
LG197_20140
Enzymes [BR:
pasi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
LG197_20140
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Motif
Pfam:
EAL
CSS-motif
Motif
Other DBs
NCBI-ProteinID:
WDM86911
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Position
4338551..4340137
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AA seq
528 aa
AA seq
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MPLTVKRRAGLGWRTLLPWVVGVLPVACGLAVMNWQIEREMHASSQATTRQVVEHVERIL
DNLSSAAHALLPLVDSPCDEVQLMLRAQVTRNAFVRSTNLFRHNALYCTSLFGAFDEPVN
PGDYIDGKLWLMDGNSVTPGHPLLVYRASDGDRGAISTVDGEHLLTALRLIGPDEELQIR
VGDAWLGKDGIVHKGVPPAAASANVQLGSTRYPFSVHGGYGADKQGQLWRSHYPALFGLL
LILGAVAGLVCRWQVRRATSPRAELRRALEADEFLPYFQPVVRKGDYRWAGAEVLMRWNH
PREGLVRPDLFIPYAEHSGQIVAMTRALMMHTAQSLAPFAGLLEDGFHIGVNITADHCRD
FSLLDDCRTFLQHFPPGRVVLTLELTERKLIEPTPVALELFEKLDAMGVKIALDDFGTGQ
SSLNYLRQFKVDYLKIDQSFVAMIGGDALSVHILETIIELSAKLGLGIVAEGVETEAQRD
YLARHEVDFQQGYLFARPMPAAQFLEALAARPAASRLPQAAPPEIMRG
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgccccttaccgtcaaacgccgcgccggcctcggctggcgcaccctgttgccctgggtc
gtcggcgtgctgcccgtggcatgcggcctggccgtgatgaactggcagatcgagcgtgaa
atgcacgccagcagccaggctaccacccgccaggtggtggagcacgtcgagcgcattctc
gacaatctgtccagcgctgcccatgctctgctgccgcttgtcgacagcccgtgcgacgag
gtccagctcatgctgcgcgcccaggtcacgcgcaacgccttcgtacgctcgaccaacctg
ttccggcacaacgccctttattgcacctcgctgttcggcgcattcgacgagccggtcaac
cccggcgactacatcgacggcaagctgtggctgatggacggcaactcggtcacaccgggc
cacccgctgctggtgtatcgggccagcgatggcgaccgcggcgcgatcagtacggtcgat
ggcgaacacctgctgacggcgctgcgcctgatcggccccgatgaagagctgcagatccgc
gtgggcgatgcctggctgggcaaggatggcatcgtgcacaagggcgtgccccctgccgcg
gccagcgcgaatgtgcagctgggctcgacccgttacccgttcagcgtgcatggcggctac
ggcgccgacaagcagggccagctgtggcgcagccactatcccgccctgttcggtctgctg
ctgatactgggcgcggtggccggcctggtgtgccgctggcaggttcgccgcgccacctcg
ccccgtgccgaactgcgccgggccctggaggccgacgagttcctgccgtacttccagccg
gtagtgcgcaagggcgactaccgctgggccggcgccgaagtgctgatgcgctggaaccac
ccgcgcgaaggcctggtgcgccccgacctgttcatcccctacgccgaacacagcgggcag
atcgtcgccatgacccgtgcgctgatgatgcacaccgcgcagagcctggcaccctttgcc
gggctgctggaggacggtttccatatcggcgtcaatatcaccgccgaccactgccgcgac
ttcagcctgctggacgattgccgaaccttcctccagcacttcccgccaggccgggtggtg
ctgaccctggagctgaccgagcgcaagctgatcgagcccacgccggtggccctggaactg
ttcgagaagctcgacgccatgggtgtgaagatcgccctggacgacttcggcaccggccag
tcaagcctcaactacctgcgccagttcaaggtcgattacctgaagatcgaccagagcttc
gtcgccatgatcggtggcgatgcgctgtcggtgcacatcctcgagaccatcatcgagcta
tcggccaagctgggcctgggcatcgttgccgagggcgtggaaacagaagcccagcgcgac
tacctggcccgtcatgaggtggacttccagcagggctacctgttcgccaggcccatgccg
gctgcccagttcctcgaagcgctggccgcacgcccggctgcgtcgcggttgccgcaagcc
gcgccccctgagatcatgcgcggctga
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