Pseudomonas asiatica: LG197_20575
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Entry
LG197_20575 CDS
T08841
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
pasi
Pseudomonas asiatica
Pathway
pasi00860
Porphyrin metabolism
pasi01100
Metabolic pathways
pasi01110
Biosynthesis of secondary metabolites
pasi01120
Microbial metabolism in diverse environments
pasi01240
Biosynthesis of cofactors
Module
pasi_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
pasi_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
pasi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
LG197_20575 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pasi04147
]
LG197_20575 (hemB)
Enzymes [BR:
pasi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
LG197_20575 (hemB)
Exosome [BR:
pasi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
LG197_20575 (hemB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ALAD
RcsA_N
Motif
Other DBs
NCBI-ProteinID:
WDM86998
LinkDB
All DBs
Position
complement(4447268..4448242)
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AA seq
324 aa
AA seq
DB search
MSNQFPSVRPRRLRQNESLRTIFQETEFRLEDLILPIFVEEGIDDFVPITSMPGVNRIPE
KLLAQEIERYARAGIKSVMTFGVSHNLDAVGSDTWNENGLVARMSRICKDTVPEMVVMSD
TCFCEYTSHGHCGVLHDHGVDNDATLANLGKQAVIAAAAGADFIAPSAAMDGQVQAIRSA
LDGAGFHDTAIMAYSTKFASSLYGPFREAGGTALKGDRKSYQMNPMNRREAVRESLLDEQ
EGADVLMVKPAGAYLDVIADIRAASRLPLAAYQVSGEYAMIKFGGLAGAIDEGRVVRESI
GAIKRAGADLILTYFAMDLAREGI
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccaattcccgtccgttcgtccacgccgcctgcgccagaacgagtccctgcgc
acgatcttccaggaaaccgagttccgccttgaagacctgatcctgccgatcttcgtcgaa
gagggtatcgatgacttcgtgccgatcaccagcatgccgggcgtcaaccgcatccccgag
aagctgctggcccaggaaatcgagcgctatgcccgcgctggtatcaagtcggtgatgacc
tttggcgtttcgcacaacctggacgccgtcggcagcgacacctggaacgaaaacggcctg
gtcgcgcgcatgtcacgcatctgcaaggacaccgtgccggaaatggtggtgatgtccgac
acctgcttctgcgaatacaccagccacggccactgcggcgtactgcacgaccacggtgtg
gacaacgacgccaccctggccaacctgggcaagcaggcggtcatcgccgctgctgcaggt
gccgatttcattgccccgtcggcggcgatggacggccaggtccaggccatccgcagcgcg
ctggatggtgccggcttccacgacaccgcgatcatggcctattccaccaagttcgcctcg
tcgctgtatggcccgttccgtgaagccggtggtaccgcgctgaagggcgatcgcaagagc
taccagatgaacccgatgaaccgccgcgaagccgtgcgcgagtcgctgctcgacgagcag
gaaggcgccgatgtactgatggtcaagccggccggtgcctacctcgacgtgatcgccgat
atccgtgccgcctcgcgcctgccgctggcggcgtaccaggtgagcggcgagtacgcgatg
atcaagttcggtggcctggctggcgccatcgatgaaggccgggtggtgcgtgaaagcatt
ggcgcgatcaagcgtgccggtgccgacctgatcctcacctacttcgccatggacctggcc
cgcgaaggcatctga
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