Pseudomonas asiatica: LG197_20600
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Entry
LG197_20600 CDS
T08841
Symbol
csiR
Name
(GenBank) DNA-binding transcriptional regulator CsiR
KO
K15735
GntR family transcriptional regulator, carbon starvation induced regulator
Organism
pasi
Pseudomonas asiatica
Brite
KEGG Orthology (KO) [BR:
pasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pasi03000
]
LG197_20600 (csiR)
Transcription factors [BR:
pasi03000
]
Prokaryotic type
Helix-turn-helix
GntR family
LG197_20600 (csiR)
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GFIT
Motif
Pfam:
FCD
GntR
Motif
Other DBs
NCBI-ProteinID:
WDM87003
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All DBs
Position
4453524..4454219
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AA seq
231 aa
AA seq
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MEALAPRQNSAFSGYERLKKDIIRGVFKPGEKLLMSTLKERYDLGVGPLREALSQLVAEH
LVNAISQKGYRVAPMSLDEMNDIYDARANLEAMIITLAIERGDDAWEASVLAHSHTLAKV
VEVKTREQRLDVWDERHKAFHTAIASGCGSKHLLQARTYLFDQAERYRHLWLTQTVFSEQ
ALELKRQEHAALVEVILARDAKRASAMMRSHLMTPVPIIAQIMHAEGIGAR
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
ttggaagcgctcgccccccgacaaaactcagcattcagcgggtatgagaggctcaagaag
gacatcatccgcggcgtgttcaaacccggcgaaaagctgctgatgagcaccctgaaggag
cgctacgacctgggcgtgggcccgctgcgcgaagcactgtcgcagttggtggccgagcac
ctggtcaacgcgatcagccagaagggctaccgtgtggcgcccatgtcgctggacgagatg
aacgacatctacgatgcccgcgccaacctggaggcgatgatcatcaccctggccatcgag
cgtggcgacgacgcctgggaggcgtcggtactggcccactcgcataccctggccaaggtg
gtggaagtgaagacccgcgaacagcgcctggatgtgtgggacgaacggcacaaggcattc
cacacggccattgcctcgggctgcggctccaagcacctgctgcaggcgcgcacttacctg
ttcgaccaggccgagcgctaccggcacctgtggctgacccagacggtgttttccgaacag
gccctggaactcaagcgccaggagcatgcggccctggtggaagtgattctggcccgggac
gccaagcgcgccagcgccatgatgcgctcgcacctgatgactccggtgccgatcattgcg
cagatcatgcatgccgagggtatcggcgcacgttga
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