Pseudomonas asiatica: LG197_21610
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Entry
LG197_21610 CDS
T08841
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pasi
Pseudomonas asiatica
Pathway
pasi00550
Peptidoglycan biosynthesis
pasi01100
Metabolic pathways
pasi01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pasi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LG197_21610 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LG197_21610 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pasi01011
]
LG197_21610 (mrdA)
Enzymes [BR:
pasi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LG197_21610 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pasi01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LG197_21610 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WDM87197
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Position
4684507..4686402
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AA seq
631 aa
AA seq
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MPQPIPLKDHEKEKHLVNRRLLACAVLVFSLVAVLVGRLYVLQVLQHDQQTAVSENNRVH
VLPIAPERGLIYDRNGVVLADNKPSFDLTMTRERAGGDTAKVLDTLAQVLSLTDDDRKQF
DKDLRRGRKPFEPVTLMVGLSEEQIALVAVNQFRLPGLEVEPQFIREYPLAEHFAHSVGY
VGRINEKEAKTLDSTEYRGTQSIGKTGIEHFYESQLHGHVGYEEVETNAQGRVMRVLNHK
APTPGQDIVLTLDAHLQLAAEKALGDRRGSVVVLDPANGDVLAMVSNPSFDPNLFVKGIS
FKQYAALRDSIDRPLFNRVLRGLYAPGSTVKPEVAIAGLDSGVITPGSRVFDPGYYELPN
YDHKYRNWNRSGDGWVDMYTAIMRSNDTYFYDLAHKLGIDRLHDYMAEFGLGQKVSLDMF
EEASGLMPSAEWKRATRRQAWFPGETLILGIGQGYMQVTPLQLAQATSLLASKGVWHRPH
LAMTVGGDAPVDPNPMPNIVLHDRHAWDQVSQGMQMVMHDPRGIARAAAAGAQYRIAGKS
GTAQVVAIKQGERYNRNKTLERHRDNALFVGFAPADHPSVVVAVMIENGEAGGRVAGPVV
REVMDAYLLDEQGHLKPQYAGGVAPRSVPHA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaacccatacccctcaaggaccacgaaaaggaaaagcacctggtcaaccgccgg
cttctggcctgcgccgtcctggtcttcagcctggtcgccgtcctggtgggccggctctat
gtgctgcaggtgctgcaacacgaccagcagaccgccgtatcggaaaacaaccgcgtgcac
gtgctgcccatcgcccccgagcgcgggctgatctacgaccgcaacggcgtggtgctggcc
gacaacaagcccagcttcgacctgaccatgacccgcgagcgggccggcggtgacacggcc
aaggtcctcgataccctggcccaggtgctgagcctgaccgacgacgaccgcaagcagttc
gacaaggacctgcgccgtggccgcaagccgttcgagccggtgaccctgatggtcggtctg
agcgaagagcagatcgccctggtggcggtgaaccagttccgcctgccaggcctggaggtg
gaaccacagttcatccgcgagtacccgctggccgagcatttcgcccactcggtaggctat
gtggggcgcatcaacgagaaagaggccaagaccctcgacagcaccgaataccggggcacc
cagtcgatcggcaagaccggcatcgagcacttctacgaaagccagctgcatggccacgtg
ggctacgaggaggtcgagaccaacgcccagggccgggtgatgcgtgtgctcaaccacaag
gccccgaccccgggccaggacatcgtcctgaccctggacgcccacctgcaactggccgcg
gaaaaggccctgggcgaccgccgcggctcggtggtggtgctcgacccggccaatggcgac
gtgctggcgatggtcagcaaccccagcttcgaccccaacctgttcgtcaagggcatcagc
ttcaaacagtacgccgccctgcgcgattccatcgaccgcccgctgttcaaccgcgtgctg
cgcggcttgtatgcccccggttcgacggtgaagccggaagtggccatcgccggcctcgac
agcggcgtgatcaccccgggcagccgggtgttcgaccccggctactacgagctgcccaac
tacgaccacaagtaccgcaactggaaccgcagcggcgatggctgggtggatatgtacacc
gccatcatgcgttccaacgacacctacttctacgacctggcgcacaagctgggcatcgac
cgcctgcacgactacatggccgagttcggcctgggccagaaggtgtcgctggacatgttc
gaggaggcgtccgggctgatgccgtcggccgagtggaagcgcgccacccggcgccaggcc
tggttcccgggcgagacgctgatcctgggcatcggccaaggctacatgcaggtcaccccg
ctgcagctggcccaggccaccagcctgctggcgagcaagggcgtgtggcaccgcccgcac
ctggccatgaccgtaggaggcgatgcgccggtagatcccaacccgatgcccaatatcgtg
ctgcacgacaggcatgcctgggaccaggtcagccagggcatgcagatggtcatgcacgac
ccgcgcggcatcgcccgcgctgccgcagccggtgcgcagtaccggattgccggcaagagc
ggcaccgcgcaggtggtagcgatcaagcagggcgaacgctacaaccgcaacaagaccctg
gagcggcaccgcgacaacgccctgttcgtaggctttgccccggctgatcacccgagtgtg
gtggtggcggttatgatcgagaacggcgaagccggcgggcgggtggcagggccggttgtg
cgggaggtgatggatgcctatctgctggatgagcagggacatctgaagccgcagtatgca
ggtggggtagcgcctcgcagcgtgccgcatgcttga
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