Pseudomonas asiatica: LG197_22775
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Entry
LG197_22775 CDS
T08841
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pasi
Pseudomonas asiatica
Brite
KEGG Orthology (KO) [BR:
pasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pasi03032
]
LG197_22775
03400 DNA repair and recombination proteins [BR:
pasi03400
]
LG197_22775
Enzymes [BR:
pasi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LG197_22775
DNA replication proteins [BR:
pasi03032
]
Prokaryotic type
DNA Topoisomerases
LG197_22775
DNA repair and recombination proteins [BR:
pasi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LG197_22775
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Metal_resist
Motif
Other DBs
NCBI-ProteinID:
WDM87414
LinkDB
All DBs
Position
4941920..4942942
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AA seq
340 aa
AA seq
DB search
MLDCPLPRTLHYVDDSQPGLTRRRWRGRFIYLDADGQRVRDSDTLARIAALAIPPAYTEV
WICADPQGHLQATGRDARGRKQYRYHAQWREIRDQHKYGRMLAFAQALPKLRAQLHDHLA
RPGLDREKVMALVISLLDHTLIRIGNQRYLRDNQSYGLTTLRNRHVEVKGSSIRFQFRGK
RGVEHNVSLNDRRLANLLKRCMELPGQALFQYLDDDGQRHSVGSSEVNQFLQQLTGADFT
AKDYRTWAGSSLALDLLRPLAWEPESEAKRQVAAIVRQVASRLGNTPAVCRRCYIHPAVL
EHYALGRLANLPKNRVRKGLDREEVALLLFLQALEEQDDH
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcttgactgccccctgccgcgcaccctgcactacgtcgacgacagccagccgggcctt
acccggaggcgctggagagggcgcttcatctacctggatgccgacggccaacgagtgcgc
gacagcgatacccttgcccgcatcgctgcactggcaatccccccggcctataccgaggtg
tggatctgcgccgacccgcaaggccacctgcaagccacaggtcgcgatgcccgtggccgc
aagcaataccgctaccacgcgcagtggcgcgaaatacgcgaccagcacaagtacgggcgc
atgctggcgtttgcccaggccctgccgaaattgcgcgcacagctgcacgaccaccttgcc
cggccaggcctggaccgggaaaaggtgatggcgctggtgatcagcctgctggaccacacc
ctgatccgcatcggcaaccagcgctacctgcgtgacaaccagtcctatggactgaccacc
ctgcgcaaccgccatgtcgaggtgaagggcagcagcatccgcttccagttccgcggcaag
cgcggcgtcgagcacaacgtcagcctcaacgatcggcgcctggccaacttgctcaagcgc
tgcatggagctgcccggccaagcgttgttccagtacctggacgacgacggccagcgccat
agcgtcggctccagcgaggtcaaccagtttctgcagcagctgaccggtgccgacttcacc
gccaaggactaccgcacctgggccggtagcagcctcgccctggacctgctgaggcccttg
gcctgggagcccgagagcgaagccaagcgccaggtcgccgccatcgtccgccaggtagca
tcacgcctgggcaatacaccggcagtgtgcaggcgctgctacattcacccggctgtactt
gaacactatgccctggggcgcctggccaacttgccgaagaaccgtgtgcgcaaaggcctg
gaccgtgaagaagtagccttgctgttatttcttcaggcactcgaggaacaggatgaccat
taa
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