Pseudomonas asiatica: LG197_24380
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Entry
LG197_24380 CDS
T08841
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pasi
Pseudomonas asiatica
Pathway
pasi03030
DNA replication
pasi03430
Mismatch repair
pasi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pasi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LG197_24380 (dnaQ)
03430 Mismatch repair
LG197_24380 (dnaQ)
03440 Homologous recombination
LG197_24380 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pasi03032
]
LG197_24380 (dnaQ)
03400 DNA repair and recombination proteins [BR:
pasi03400
]
LG197_24380 (dnaQ)
Enzymes [BR:
pasi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LG197_24380 (dnaQ)
DNA replication proteins [BR:
pasi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LG197_24380 (dnaQ)
DNA repair and recombination proteins [BR:
pasi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LG197_24380 (dnaQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WDM87702
LinkDB
All DBs
Position
complement(5229905..5230663)
Genome browser
AA seq
252 aa
AA seq
DB search
MEQQQDKRFVILDTETTGMPVSEGHRIIEIGCVEVIGRRLTGRHFHVYLQPDRESDEGAI
NVHGITDAFLVGKPRFGDVAEEFFEFIQGATLVIHNAAFDVGFINNEFALLGQQDRADIS
QHCTILDTLLLARARHPGQRNSLDALCKRYDIDNSGRELHGALLDSELLADVYLAMTGGQ
TSLSLAAHGAEAGDEGTGAGGSEIRRITGRVPGRVIMASAEELEAHAERLAAIAKSAGGP
SMWQALTETPVG
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
gtggagcagcagcaagataaacggttcgtcattctcgataccgaaaccacgggtatgccg
gtcagcgaaggccaccggatcatcgagatcggctgtgtcgaggtcatcggccggcgcctg
accgggcggcacttccacgtctacctgcagccagaccgcgagagtgacgagggcgccatc
aacgtccacggcatcaccgatgccttcctggtcggcaagccacgctttggcgatgtcgca
gaggagttcttcgagttcatccagggcgctacgctggtcatccacaacgcggcgttcgac
gttggcttcatcaacaacgaatttgccttgctgggccagcaggaccgcgcggacatttcg
cagcactgcaccatcctcgacaccctgctgctggcgcgcgcgcgccacccggggcagcgc
aacagcctggatgcgctgtgcaaacgctacgatatcgacaactcgggccgtgagctgcat
ggcgcattgctcgactcggaattgctggctgacgtctacctggcaatgaccggtggccag
accagcctgtcgctggccgcgcatggggcagaagccggggatgaagggacgggtgctggt
ggcagcgagattcgccgtattaccgggcgtgtgcccgggcgggtgatcatggccagtgcc
gaggagctggaggcgcatgccgagcgcctggcggccattgccaagtcggcgggtgggcca
tccatgtggcaggctctgaccgagacacctgttggttga
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